Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4414 |
Symbol | |
ID | 5672766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5270758 |
End bp | 5272434 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641243282 |
Product | signal transduction histidine kinase regulating citrate/malate metabolism |
Protein accession | YP_001508699 |
Protein GI | 158316191 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAA CACCCGGTGG TGCGGACGAC CCCAGCGGCG GCCGCGGCGC GCGGCTGAGC CGGCGCAGCA TCGCGGGCCA GGTGCTCGTC CTGCAGGTCG CGGTGGTCGT ACTTCTTGTG GTGGCCGCGG TTGCCGCCTC GGTGCTACAG GCCCGGCGCA CGGCGGAACG CCAGGCACGC GATCTCGCCG TCGCGGTCGC GGAGACCTTC GCCCATGCTC CAGGGATGGT CGCGGCCCTG AGCTCGTCCG ATCCGAGCGC TTCGCTGCAG CCGCTGGCCG AGGCCACCCG AACCCGGACC GGGGTCGACT TCCTCGTCGT GATGAATCCG GTCGGGATCC GGTACACCCA CCCTGACCCG ACCCGAATCG GCCAGCGCTT CCTCGGACAC ACCGAACCGG CGGTACGAGG CGAGGTGCTC ACCGAGACCT ACTCGGGGAC GTTGGGCCCG TCAGTACGCG CGGTCGTGCC GGTCACCACC AGCGATGGGA AGATTGCCGC TCTGGTCGCC GCAGGCATCA CCGTCGAGAA CGTCAGCCAG ACGGCCGGCC GGCAACTTCC GGTACTCCTG GTTGCCGGAC TGGCTGCCGT CGCGCTAGCG GTGGGTGGCA CGGTGCTGGT CAACCGCCGC CTTCGGCGGC AGACTCGCGG CCTCGGCCCG GTAGAGATCA CCAGGATGTA CGAACATCAC GACACCGTGC TGCACGCTGT TCGGGAAGGG GTTCTCATCG TCGACGACCA GGCTCGGGTG CTCCTGGCCA ATGATGAGGC CCGCCGGCTC CTCGGCCTCC CGTCGGACTC CCATGGGCGT CCGGTCGCGG AACTCGGTCT TGATCCGGCG GCGCTGGACC TACTCGGCAG TGGTCGTCCA GCCGAGGACA CCGTGCTGCT GGCTGGCGAC CGGATGCTCG CGGTCAATCA GAAACCCACC GTCCGCGACG GGAAACCGCT CGGCAGTGTC GCGACGATCC GGGACACCAC CGAACTCCAA GCGCTGACCG GCGAACTCGA CGCGGTCCGG GGCATGGCGG ATGCGTTGCG TGCCCAGAGC CACGAAGCCG CGAACCAGCT TCATATCGTG GTCACCCTGA TGCAGCTCGA TCGGCTGGAC GAGGCCGTCG AGTTCGCCAC CGCCGGGCTC GCTGGCTCAC AGCAGCTCGC TGACCGGATG CTGACCGCCG TCGACGAGCC GGTCCTGGCG GCTCTGCTGC TCGGTAAGAC CGCCCAGGCG GCCGAGCGCG GCGTGGAACT CGTCGTCACC GACGACACCC GGTTCGAGGT CTTCGACGTC GAGGCGGCTG AGCTGGTGAC GGTCGTCGGC AACCTCATCG ACAACGCAAT CGAGGCCGCG GTCGCAGGAG AGGCCCCGAG GCGGGTGACG GTCTCGGTGC GTACCGAGCC CGATGGCCTG ACGGTCCGGG TCTCTGACAC AGGTCATGGC CTCGATCCGA CACAGGTCGC GGCGGCGTTC GAACGCGGCT GGACCACCAA GACGAGCACG TCGACGGGCG AGGCAGCGCG CGGGCGAGGT CTCGGGCTCG CCCTGGTCCG GCAGGTCGTC CGGCGCCACG GCGGCCAGAT CGAGGTGGGT CGCGACGGCG GTGCGGTGTT CACTGTCCGC ATCCCTCGGC AACATGGGAG CGTCGACATG TCCACGGCGA TGACTCCGGC CCGATGA
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Protein sequence | MTATPGGADD PSGGRGARLS RRSIAGQVLV LQVAVVVLLV VAAVAASVLQ ARRTAERQAR DLAVAVAETF AHAPGMVAAL SSSDPSASLQ PLAEATRTRT GVDFLVVMNP VGIRYTHPDP TRIGQRFLGH TEPAVRGEVL TETYSGTLGP SVRAVVPVTT SDGKIAALVA AGITVENVSQ TAGRQLPVLL VAGLAAVALA VGGTVLVNRR LRRQTRGLGP VEITRMYEHH DTVLHAVREG VLIVDDQARV LLANDEARRL LGLPSDSHGR PVAELGLDPA ALDLLGSGRP AEDTVLLAGD RMLAVNQKPT VRDGKPLGSV ATIRDTTELQ ALTGELDAVR GMADALRAQS HEAANQLHIV VTLMQLDRLD EAVEFATAGL AGSQQLADRM LTAVDEPVLA ALLLGKTAQA AERGVELVVT DDTRFEVFDV EAAELVTVVG NLIDNAIEAA VAGEAPRRVT VSVRTEPDGL TVRVSDTGHG LDPTQVAAAF ERGWTTKTST STGEAARGRG LGLALVRQVV RRHGGQIEVG RDGGAVFTVR IPRQHGSVDM STAMTPAR
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