Gene Franean1_4394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4394 
Symbol 
ID5672747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5239046 
End bp5239843 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID641243263 
Productmethyltransferase type 11 
Protein accessionYP_001508680 
Protein GI158316172 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCACC CATATCGGGT CGTTCCGGAA TCGTGCGATC AAAGGCCAGC GGCGACGAGC 
CCGAACGGAC GACGGCGGTT GCCGCGCCGG CGCCGCAACG ATCCCGCGCA GTACGATGAC
CTCGCCGACC AGTGGTGGCC CACTCACGGA CGGTTCGCGG CGTTGCACTG GCTCGCCGAG
GCGCGCGCCC GCCTCATCCC GGCCCCACCT CGCACCGGCG CCCCGCTGCT CGACCTTGCC
TGCGGTGGCG GCCTGCTCGC GCGGGTGCTG ACTGGCAAGC TCGCGGGATG GCGGCACATT
GGTGTCGATC TATCCCCGCT GGCACTCCGC CAGGCCAGTG ACCACGGCGT CGAGGCAGTC
CAGGCCGACG TGACGCGCCT GCCATTCCCC GACGGCAAGT TCTCCTGCGT CGTCGCTGGC
GAGATGTTCG AGCATATCGA GGATCTCGAC GCGGCCTGCA CGGCGATCGG GCGAGTCCTC
GCTCCGGGCG GAACGTTGGT GATCGACACG CTCGCGGACA CTCTGTTCTG CCGGATCGGT
CTGGTGCGTC TCGCCGAGCG CCTGCCGGGT GGCCCGCCGC CTCGTATACA CGATCCGCGC
CTGCTGGTGT CGCCCGACCG GTTGGGCGCG GCGCTGGATC GGTGCGGCAT CGAGATGACT
GTCGTTGGCG GCCTTCGCCC CTCGCTTCCT GACTACGTCC GTTGGCTCGT CCGTCAAGCC
GACTCGGTGC GGATGGTGCC GACCGAGTCC ACCGCGGGTG TCTACCAGGC CGTCGGGACA
AGAAGGGAAC TCCGGTGA
 
Protein sequence
MFHPYRVVPE SCDQRPAATS PNGRRRLPRR RRNDPAQYDD LADQWWPTHG RFAALHWLAE 
ARARLIPAPP RTGAPLLDLA CGGGLLARVL TGKLAGWRHI GVDLSPLALR QASDHGVEAV
QADVTRLPFP DGKFSCVVAG EMFEHIEDLD AACTAIGRVL APGGTLVIDT LADTLFCRIG
LVRLAERLPG GPPPRIHDPR LLVSPDRLGA ALDRCGIEMT VVGGLRPSLP DYVRWLVRQA
DSVRMVPTES TAGVYQAVGT RRELR