| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4360 |
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| Symbol | |
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| ID | 5672715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5205220 |
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| End bp | 5210130 |
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| Gene Length | 4911 bp |
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| Protein Length | 1636 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243233 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001508650 |
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| Protein GI | 158316142 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG3899] Predicted ATPase |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCTC AGCGAACGCC ACCGAGCCGG GATCCGCCGG CGGTGGTGCG GACGGAGCTG
CTGCATGAGA CGGAGCAGAC CCGGGTGACT CGGCTGGTGT TCCCGGCTGG GAGTGTGATC
CGGAAGGAGC CGCTGGGACC TGGCTCGCAG CGGCGGCTGC GTCATGAGGT TGAGGTCCTC
GAGCGTCTGG TCGGGGTCAA GGGGGTCGTG CAACTGGCGG ACGGTGTGTC GACCTGCCCG
GGGTCGATCC TGCTGGCCGA CGTCGGCGGT GCGGTGCTGT CCGGGCGGAC CATGCCACTG
GATCCGGCCG AGCTGGTCGA TCTGGCCGGA TCGCTCGCGC GCACCGTGGC AGCGATGCAC
CGGCGGGGTG TAGTGCATCG GGACATCAGC CCGGCGAACA TCGTATTGGG TGGGGACCGG
GGTAGGCCGT TCCTGGTCGA CTTCGCGTTG GCTACGAACT GCGTGGAGGT CGAGCCGGGG
TTCCTCCACC ACAACGAGAT CGTCGGGACG GTTCCGTACC TGGCGCCGGA GCAGACCGGC
CGGACGGGCA GCCCCATCGA CCAGCGGGCC GACCTGTACG CGCTCGGGGC CACCCTCTAC
GAGCTGGCGA CCGGCACACC ACCGTTCGGC GCGGGCGACC CCCTGCGGAC CATTCACGAC
CATCTCACGC GAGTGCCGGC ACCGCCGTCG GCGGTGAACC CGTCGCTGCC GGTCGACATG
TCGCGGATCA TCCTGCATCT GCTGGAGAAG GAGCCGGACG ATCGCTACCA GAGCGCGGAC
GGGCTGGCGC ACGATCTCGC GCTGGTCCAC CGCGGCACCG CGGTGGTGCG TCCCGGCGAG
CACGATCTTC CGGCGCGGCC GCTGACGCCG TCCCGGCTGG CCGGCCGCGA CGAGGAGACC
GCCGAGCTGG GCGCGGCGTT CGCCGACGCG CTGGCGGGCC GCTGCCATGG GCTCCTCGTC
AGCGGCCCGC CGGGGGTGGG CAAGACGTCC CTGGTCAACG CGCTGCGGCC GATCGTGGCC
GGTGGCGACG GCTGGTTCGT GGCGGGCAAG TTCGACCAGT ACCGCCGGGA CCAGGAGTAC
GACGCAGTCC GCCAGGCGCT GCGGGCGCTG GGTCGGCTGC TGCTGGCCGA ACCGGAGGCC
TGTCTGGTCG AGGTGCGGGA GCGGCTCCTG CGGGCGTTGG GACCCAACGC CGGCCTGGCC
GCCGCCGTCG TGCCGGAGCT GGCGGCGCTG CTAAGGGTCC CCCCGGCGCT GGGGGACCCG
ATAACTGCAC AGGTGCGAGC ACAGCGCGTT GCAGTGGAGA CACTGCGCGC CGTTGCCTCC
CGGAAACGCA CGGTGGTGTT CTTCGTCGAC GACCTGCAGT GGGCCGGGCG GACGCCGCTG
GGCTTCCTCG ACCTGATTCT CGGTGGCGAG GAACAGATCG AGGGACTGCT GCTGGTCGGC
GCGTACCGGG AGAGGGAGGT GGACGCCACC CACCCGCTGG CGCCGATGCT CGCCCGCTGG
CGCCGCCAAC CGGCCGGGCC GCAGCACCTG CGGTTGGGTA ATCTGCCGCC AGTAGACCAG
ACGGCCATGG TGGCCGACCT ACTGCGCCTG TCCCCAGAGC GCGGCGCGGA GCTCGCACGG
CTGATCGCGC CGTCCACCGC GGGCAATCCG TACGACACGG TGGAGCTACT CAACTCGCTG
CGCCATGACG GCGTACTGGC CCTCGGAGAC GACGGTTGGC GATGGGAGCA GGCCACGTTG
CGCCGCCGAC TGGACTGCGT GGACGTGACC GGGCTGCTGC GTGCCCGTAT GGCTGTGTTG
TCGCCGGCCG CCAGAGAGAT GCTGGCCATG ATGGCGTGCC TGGCCGGCCG GGTGGAACTC
GACCTCCTGG AAGCCGCCAC CGGGCTTGCG GCGGATGAGA TCGAGCGGCG GCTCGCCCCC
GCGTTCACCG ACGGGCTTCT CGTGCTGGAA TCCGACGGCC GACAGAGCAT GCGCTTTCGT
CACGACAAGG CCCAGGAGTC CGTCCTGAGC GGCCTCACCC CGCAGGCCGA ACGCGCCATG
CGACTGTGCC TGGCCCGGAG GCTGGCCGAC CGACCTGAGC TGTTCGCCGT GGCGGCGGCG
CAGTACCTGC TCGTGGTCGA CGCCGTGCAC GCCCCCGAGG AACGGCGGCT GATGGCCGGT
CTCTTCCGGC GCTCTGCCGA CGAGGCGAAG CTGCTGAGCA ACCACCCCTT GGTGGAGAGG
TTCCTGACCG CGGCGTTGAG GCTCGTCGAC CCGGCGGACA CCGACCAGTT GATCGACGTC
CACACCAGCC GGCACGCGGC CCTGTACATG CTCGGGCGGC TTGAGGAGAC CGACGAGGAG
TACCAGACCA TCGGCCGGCT GTGCACCGAT CCAGCTCAGC GCACGGCGGC GACCCTGGTG
CAGGTCAGCA GCCTCACCAA CCAGGGCCGC GCCGCCGAGG CGATGCGGCT CGGCCTCGAC
CAGCTGCGAC AGCTCGGCCT CGCCGTCCCG GACCGGGACC ACCTCGACGC CGAGATCGAC
CGCAGACTCG ACGCGCTCTA CCAGTGGATC GACCAGACCA GCGAATCCGA CGATCTACGA
CGACCGCGAA TCACCGACCG TTCGCAACTC GACACCGCCA GGATCATCAA CCGGCTCATG
CCCCCGGCGT ACTTCTCCGA CCAGAAGATG CTGGCCTGGC TGACCGTGAC GACGCTGGAG
ATATGGGCAC GGCACGGCCC GGATCCCACC TTGCTCGGCC CGGCCGGCCA CATCACCTTT
GTGACCGTCG TCCGCAGACG GGACTACCGC ACCGGGTGGC GCGTGATGCG GCGGATCCTC
GCGGTCTGTC AGGCGCGCGG CTATGAGCCT GACATGTGGC AGGTGTGGTT CCTGTATGCA
GCCGGTACCG GCCACTGGTT CGACCCCCTC GAGGACAACC TGTCCGCGAC GCGCCGCGCA
TTGGAAGGTT TGATCCAGAG CGGTGACCTG CTGAATGCGT GCTGGGCCCG CTACGTGCTG
ATGTCCACCA TCCTGGACTG TGCACCACTG CTTGATACAT TCGTTGCTGA GATCGACGAG
GCGCTGGCGT TCACCAGACG CACCAGCAAC GGCAACGCCG AGGAGACGTT CCGGGCCTAT
GGCCAGCTGG CGAGAGTGCT GCGAGGCGAG GTCGTCACCT CGGCAGCCGG CGAAGCGGCC
CAGCTCGGCA GGCTGGCCGC CAACCCGTTC GCCGCCGCCC ACCTGCACAT TACCCGGGCG
CTCGCTGCAG CCATCCTCGA TCAGCCTGCC GAGCTGGTCC GACACACGGC GGCCGCGATG
CCGTTGCTGC CGTCCATCCA GGCGCTCTAT CCGATGGCGG TGGCGTACCT GCTGCGAGCC
ATGGCGTTGG CGGGCCAGGC CCGCACGGCG GAAGCGGGCC AGCGTGGCGC GGTGCTGGCC
GAGCTGGACG AGGCGATCGA ATGGCTGACC TCGCGCGCGG CCGACGCGCC GGTCAACTTC
CTGCACCTGC TGCGCCTGGT GGAGGCGGAG CGGGCCTGGA CCACCGGCGA CTTCCGCAAG
GCGGCGTACA CGTTTGATGT GGCACAGCGA GAGGCCTCCA TACGCGCACG GCCGTGGCAC
CGGGCGCTGA TCCTGGAACG CGCCGCACGG TTCTACCTGG CCCACGGCAT GGAGGAAGCC
GGCCATCTGC TGCTGACCGC GGCCCGCCGC CAGTACCTGG CCTGGGGCGC GACGGCGAAG
GTCAGCCAGC TCGACTGGGC CCACTCGACG CTACGAGTTG AGCCCACGGC TGCGGAACCG
GCCGACCAGC CATCAGCAGA GCCTTCTGCC CGCCGCTCCA CCGTCACGAC CGGCACCATC
GACCTGCTCG GCATCGTCGC GGCCTCCCAG ACGCTCAGCT CCGAGACCAC CCTCGACGGC
CTCCGGACCA GGGTCGCGGG AATCCTGTCA GCCATGACCG GCGCCACGGA CGTTCACTTC
CTGCTACGTG ACCAGCAGGA CCGCGGCTGG CTGGTGTCTG TCGGCGGCGG CACGGTCTCG
CTGCCGGAGG CCGGCCGGCG GCGGATGCTG CCGTCCTCGG TCGTCCGGTA TGCCGAACGC
ACCGGCGAGC CTGTCGTCGT CGCCGATCCC ACCCGTGATG ACCGGTTCTG CCACGACCCT
TACTTCGCCG ACGTGGACCG CTGCTCGCTA CTGGCCGTAC CCATCATGAT CCGCGGCGGA
CTACGGGCGA TGCTGCTGCT GGAGAACCGG ATGATCCGCG GCGCGTTCTC CACCGAACAC
CCCGAAGGGA TCATGCTCAT CGCGGGGCAG CTGGCGGTCT CGCTCGATAA CGCCCTGGTG
TACGCGTCGC TGGAACGCAA GGTCGCCGAG CGAACCCAGC AGCTCGCCGC CGCCAACCGG
CGGCTGGAAC AGCTCTCGCG CACCGATTCG CTCACCGGAC TACCCAACCG GCGACGCCTC
GAGGAGGTCC TTGACGCCGA ATGGCACCGG GCCCGACACC AGGCGGCGCC CATCGCGCTG
GCGATGGTCG ACATCGACCA CTTCAAGCTC TACAACGACC ACTTCGGACA CGCCGCCGGC
GACCGGTGCC TCCAGCGGGT CGCCGCCTGC CTGGCCGAGA ACGTCCGTAG CACCGACATG
GCGGCCCGCT ACGGAGGCGA GGAGTTCGCC GTGGTCATGC CGGACACCAA CTCCGACACC
GCCGTCCAGC TGGCCCGACA TCTCTGCTCC GCTGTCGCAG AGCTGGCCGA ACCACATCCG
CTGGCCATCG ACTGCATCGT CACCGTGAGC ATCGGGGTCA CGGCGGTCAT TCCCACTCCC
GGCGACACCA CGGCGGTGTT TGTCGAGCTC GCCGACGTCG AGCTGTACCG GGCCAAACGC
GGCGGACGCA ACCGGGTAGA AATTGCACTC CCACACCCCG CATCGCGATA A
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| Protein sequence | MRSQRTPPSR DPPAVVRTEL LHETEQTRVT RLVFPAGSVI RKEPLGPGSQ RRLRHEVEVL
ERLVGVKGVV QLADGVSTCP GSILLADVGG AVLSGRTMPL DPAELVDLAG SLARTVAAMH
RRGVVHRDIS PANIVLGGDR GRPFLVDFAL ATNCVEVEPG FLHHNEIVGT VPYLAPEQTG
RTGSPIDQRA DLYALGATLY ELATGTPPFG AGDPLRTIHD HLTRVPAPPS AVNPSLPVDM
SRIILHLLEK EPDDRYQSAD GLAHDLALVH RGTAVVRPGE HDLPARPLTP SRLAGRDEET
AELGAAFADA LAGRCHGLLV SGPPGVGKTS LVNALRPIVA GGDGWFVAGK FDQYRRDQEY
DAVRQALRAL GRLLLAEPEA CLVEVRERLL RALGPNAGLA AAVVPELAAL LRVPPALGDP
ITAQVRAQRV AVETLRAVAS RKRTVVFFVD DLQWAGRTPL GFLDLILGGE EQIEGLLLVG
AYREREVDAT HPLAPMLARW RRQPAGPQHL RLGNLPPVDQ TAMVADLLRL SPERGAELAR
LIAPSTAGNP YDTVELLNSL RHDGVLALGD DGWRWEQATL RRRLDCVDVT GLLRARMAVL
SPAAREMLAM MACLAGRVEL DLLEAATGLA ADEIERRLAP AFTDGLLVLE SDGRQSMRFR
HDKAQESVLS GLTPQAERAM RLCLARRLAD RPELFAVAAA QYLLVVDAVH APEERRLMAG
LFRRSADEAK LLSNHPLVER FLTAALRLVD PADTDQLIDV HTSRHAALYM LGRLEETDEE
YQTIGRLCTD PAQRTAATLV QVSSLTNQGR AAEAMRLGLD QLRQLGLAVP DRDHLDAEID
RRLDALYQWI DQTSESDDLR RPRITDRSQL DTARIINRLM PPAYFSDQKM LAWLTVTTLE
IWARHGPDPT LLGPAGHITF VTVVRRRDYR TGWRVMRRIL AVCQARGYEP DMWQVWFLYA
AGTGHWFDPL EDNLSATRRA LEGLIQSGDL LNACWARYVL MSTILDCAPL LDTFVAEIDE
ALAFTRRTSN GNAEETFRAY GQLARVLRGE VVTSAAGEAA QLGRLAANPF AAAHLHITRA
LAAAILDQPA ELVRHTAAAM PLLPSIQALY PMAVAYLLRA MALAGQARTA EAGQRGAVLA
ELDEAIEWLT SRAADAPVNF LHLLRLVEAE RAWTTGDFRK AAYTFDVAQR EASIRARPWH
RALILERAAR FYLAHGMEEA GHLLLTAARR QYLAWGATAK VSQLDWAHST LRVEPTAAEP
ADQPSAEPSA RRSTVTTGTI DLLGIVAASQ TLSSETTLDG LRTRVAGILS AMTGATDVHF
LLRDQQDRGW LVSVGGGTVS LPEAGRRRML PSSVVRYAER TGEPVVVADP TRDDRFCHDP
YFADVDRCSL LAVPIMIRGG LRAMLLLENR MIRGAFSTEH PEGIMLIAGQ LAVSLDNALV
YASLERKVAE RTQQLAAANR RLEQLSRTDS LTGLPNRRRL EEVLDAEWHR ARHQAAPIAL
AMVDIDHFKL YNDHFGHAAG DRCLQRVAAC LAENVRSTDM AARYGGEEFA VVMPDTNSDT
AVQLARHLCS AVAELAEPHP LAIDCIVTVS IGVTAVIPTP GDTTAVFVEL ADVELYRAKR
GGRNRVEIAL PHPASR
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