Gene Franean1_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4348 
Symbol 
ID5672703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5192005 
End bp5192961 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID641243221 
Producthypothetical protein 
Protein accessionYP_001508638 
Protein GI158316130 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCG CCGATCTGCC CTTCCTCGGT GTCGGGCTGA ACTACGAACC GCCGATGCAC 
GACCAGTACC TCGCCCACCA CGACGAGATC GACTACCTCG AACTGCCGAC CGACGCGTTC
CTGCTGCGGA TGCAGTGGGA CGACGAGGAC GGCCGGACGG CCTGGCGGGA CCGGGCGGTC
GAGATCGCCG GCGCCTTCCC CGTCGTGGCG CACGGCATCC GGATGGGGCT GGCCGACGCC
GCGCCGTACC GGACGTCCTA CCTCGACCGG CTCGAGCCGT TCCTGGACCT GATCGACCCG
GTGTGGTTCA GCGACCACCT CGACCAGGGG TCGGTGCCGG ACGGAGCGCG GCGCACCGAG
CTGATGCACG GCATTCCGAT CGCCTTCACG GCAGAACAGG CGCAGGCTGT CCGCCGCAAC
ATGCAGACCG TCACCGACCG GGTCCGGCGG CCGCTGCTCG TCGAGAACAC CTGGTACGAC
TACATGATCA AGATCCCGGG TGCGATGGAC GAACCCGAGT TCGTCCGGCA GGTGCTCGAC
GGCACCGGCC ACGGCCTGCT GCTCGACCTC ACCAACACCT GGATCAACGC CCAGAACTAC
GGCTTCGACG TCGATGCGTG GCTGGCCGCC GCACCACTGG ACCGGGTCGT CGAACTGCAT
GTCGCCGGCG GCGAGCTGCG CACCCGAGGC CCGAAAGCGG GCACCTGGCA CGACAGCCAC
AGCCGTCCCG TTCCCGAGCA GGTGTGGGCG CTGGTTGCGG ATGTCGCCGC CGCCGCACCG
GTTCGCGCGA TCACCCTCGA ATGGTCCAAC GACGTGCCGC CGATGCCCGA GCTGCTGGAC
CAGCTCAGCC GGGCCCGGCA GCTTCTGCAC GCCTCGCCCT TTTACCAGAA CAAACGTGTC
GCCGCCCCGG AAGGAATATC TCATGTCACT CCAGGCAATG CAGTTCGTCA TCGGTAA
 
Protein sequence
MMIADLPFLG VGLNYEPPMH DQYLAHHDEI DYLELPTDAF LLRMQWDDED GRTAWRDRAV 
EIAGAFPVVA HGIRMGLADA APYRTSYLDR LEPFLDLIDP VWFSDHLDQG SVPDGARRTE
LMHGIPIAFT AEQAQAVRRN MQTVTDRVRR PLLVENTWYD YMIKIPGAMD EPEFVRQVLD
GTGHGLLLDL TNTWINAQNY GFDVDAWLAA APLDRVVELH VAGGELRTRG PKAGTWHDSH
SRPVPEQVWA LVADVAAAAP VRAITLEWSN DVPPMPELLD QLSRARQLLH ASPFYQNKRV
AAPEGISHVT PGNAVRHR