Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4319 |
Symbol | |
ID | 5672674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5159955 |
End bp | 5160719 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641243192 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001508609 |
Protein GI | 158316101 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0877268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.62035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTCA ACGGAAGGTC GGTTCTGGTC ACCGGCGGCG CGTCGGGCCT GGGCCTGGGT ACCGCGCGGG TCCTGCTGGA GCGCGGCGCG GCGGTCACCG TCGTGGACCT GCCGTCGTCG CCGGGCAAGG ACGTCGCCGC CGAGCTCGGC GTGCGCTTCG TCGCCGCGGA CATCACCGAC GCCGAGCAGT TCGAGGCGGC GCTGGACGAG GCCGCGTCCG ACGGCCCGCT GCGTGCCGTC GTGCACTGCG CCGGCCGGGG CGGCGACCGC AACCGCATCC TCGACAAGCA GGGCAACGCC GGCCCGCTCG ACAGCTACGC CGACGTCATC CGGGTCAACC TGGTGGGCAC GTACAACGTC GTGCGGCTGG CCGCGCAGCG GATGGCGAAG AACGAGGAGC TGCTCGACGG CGACCGCGGC GCGATCGTGC TGACCGCCTC CGTCGCGGCC TTCGAAGGCC AGATCGGGCA GACCGCCTAC GCCAGCGCGA AGGCCGGGGT GCGCGGGATG ACGATCGTCG CGGCCCGGGA CCTGGCGAGC TGGGCGATCC GGGTGAACAC CATCGCCCCC GGCGTGTTCG AGACCCCGAT GCTGGGCCGG CTGCGCGACG ACATCCGTGA CGGCCTGGCC GCGGGGGTGC CGCACCCGAA GCGGCTGGGC ACTCCGGCCG ACTTCGGCCG CCTGGCCACC GACCTGCTCG AGAACTCCTA CCTCAACGGC GAGGTCATCC GGCTCGACGG CGCACTACGG ATGGCGCCCC GCTGA
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Protein sequence | MLLNGRSVLV TGGASGLGLG TARVLLERGA AVTVVDLPSS PGKDVAAELG VRFVAADITD AEQFEAALDE AASDGPLRAV VHCAGRGGDR NRILDKQGNA GPLDSYADVI RVNLVGTYNV VRLAAQRMAK NEELLDGDRG AIVLTASVAA FEGQIGQTAY ASAKAGVRGM TIVAARDLAS WAIRVNTIAP GVFETPMLGR LRDDIRDGLA AGVPHPKRLG TPADFGRLAT DLLENSYLNG EVIRLDGALR MAPR
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