| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4319 |
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| Symbol | |
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| ID | 5672674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5159955 |
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| End bp | 5160719 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243192 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508609 |
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| Protein GI | 158316101 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0877268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.62035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTCA ACGGAAGGTC GGTTCTGGTC ACCGGCGGCG CGTCGGGCCT GGGCCTGGGT
ACCGCGCGGG TCCTGCTGGA GCGCGGCGCG GCGGTCACCG TCGTGGACCT GCCGTCGTCG
CCGGGCAAGG ACGTCGCCGC CGAGCTCGGC GTGCGCTTCG TCGCCGCGGA CATCACCGAC
GCCGAGCAGT TCGAGGCGGC GCTGGACGAG GCCGCGTCCG ACGGCCCGCT GCGTGCCGTC
GTGCACTGCG CCGGCCGGGG CGGCGACCGC AACCGCATCC TCGACAAGCA GGGCAACGCC
GGCCCGCTCG ACAGCTACGC CGACGTCATC CGGGTCAACC TGGTGGGCAC GTACAACGTC
GTGCGGCTGG CCGCGCAGCG GATGGCGAAG AACGAGGAGC TGCTCGACGG CGACCGCGGC
GCGATCGTGC TGACCGCCTC CGTCGCGGCC TTCGAAGGCC AGATCGGGCA GACCGCCTAC
GCCAGCGCGA AGGCCGGGGT GCGCGGGATG ACGATCGTCG CGGCCCGGGA CCTGGCGAGC
TGGGCGATCC GGGTGAACAC CATCGCCCCC GGCGTGTTCG AGACCCCGAT GCTGGGCCGG
CTGCGCGACG ACATCCGTGA CGGCCTGGCC GCGGGGGTGC CGCACCCGAA GCGGCTGGGC
ACTCCGGCCG ACTTCGGCCG CCTGGCCACC GACCTGCTCG AGAACTCCTA CCTCAACGGC
GAGGTCATCC GGCTCGACGG CGCACTACGG ATGGCGCCCC GCTGA
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| Protein sequence | MLLNGRSVLV TGGASGLGLG TARVLLERGA AVTVVDLPSS PGKDVAAELG VRFVAADITD
AEQFEAALDE AASDGPLRAV VHCAGRGGDR NRILDKQGNA GPLDSYADVI RVNLVGTYNV
VRLAAQRMAK NEELLDGDRG AIVLTASVAA FEGQIGQTAY ASAKAGVRGM TIVAARDLAS
WAIRVNTIAP GVFETPMLGR LRDDIRDGLA AGVPHPKRLG TPADFGRLAT DLLENSYLNG
EVIRLDGALR MAPR
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