Gene Franean1_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4255 
Symbol 
ID5672610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5074870 
End bp5076165 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content71% 
IMG OID641243128 
ProductO-acetylhomoserine aminocarboxypropyltransferase 
Protein accessionYP_001508545 
Protein GI158316037 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0202385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.589237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT CGAACTGGTC GTTCGAGACG CAGCAGATCC ACGCGGGCGC CCAGCCCGAT 
CCGACGACCG GTGCGCGAGC CGTCCCGATC TACCAGACGA CGAGCTTCGT CTTCCGCGAC
ACCGACCACG CGGCCGCGCT GTTCGCGCTC GGCGAGCCGG GCAACATCTA CACCCGGATC
ATGAACCCCA CCCAGGACGT CTTCGAGCAG CGCGTCGCCG CCCTCGAAGG CGGGGTCGGC
GCGCTCGCCA CGGCATCGGG GCAGGCGGCG GAGACGCTGG CGATCCTCAA CCTGGCCGAG
GCCGGCGACC ACATCGTCAG CTCCGCGAAC CTCTACGGCG GTACCTACAA CCTGTTCCAC
TACACGCTGC CCAAGTTCGG CGTCTCGGTG TCGTTCGTCG ACAACCCGGA CGACCTTGAC
GCCTGGCGGG CCGCGGTACG CCCCGAGACG CGGGCCTTCT ACGGCGAGAC GATCGGCAAC
CCGCGCGGGG ACGTCTTCGA CACCGAGGGC GTCGCGGCCG TCGCGCACGA GGCCGGGATA
CCTCTGATCA TCGACAACAC CCTGGCGACG CCCTACCTGC ACCGGCCGTT CGAGCACGGC
GCCGACATCG TCGTGCACTC GGCGACCAAG TTCATCGGCG GCCACGGCAC CTCGATCGGC
GGGATCATCG TCGACAGCGG CCGGTTCGAC TACGGCGCCA GCGGGCGGTT CGCGAACTTC
ACCACCCCCG ACCCGAGCTA CCACGGCCTG GTCTACTGGG ACGCCCTCGG CCACGGCAGC
TACATCGCCA AGGCCCGGGT GCAGCTCCTG CGCGACCTCG GCCCGGCCGT CGCGCCGCTC
AACTCCTTCC TGTTCCTGCA GGGCCTGGAG ACGCTGTCAC TGCGGATGGA GCGGCACAGC
GCCAACGCCC AGCGGGTCGC CGAGTGGCTG CGGGCGCGCG ACGAGGTGAG CTGGGTCGCC
TACCCGAAGC TGGCCGGTTC GCCGTGGTAC GAGCGGGCGA GCCGGGTCCT GCCCCGCGGC
GCGGGCGCCG TGCTGGCGTT CGGTATCGAG GGCGGTGCGG CGGCGGGCCG GAAGTTCGTC
GAGGGTCTGG AGCTGTTCAG CCACCTCGCC AACATCGGCG ACGTCCGTTC GCTGGTCATC
CACCCGGCGA CGACCACCCA CTCGCAGCTC ACCGACGCCG AGCAGGCGGC GACCGGGGTC
ACCCCCGACC TGATCCGGCT GTCGGTGGGC ATCGAGGGCA TCGACGACAT CCTCGCCGAC
CTCGACGCAG GCTTCCGGGC CGCGAAGTCC GGATGA
 
Protein sequence
MTESNWSFET QQIHAGAQPD PTTGARAVPI YQTTSFVFRD TDHAAALFAL GEPGNIYTRI 
MNPTQDVFEQ RVAALEGGVG ALATASGQAA ETLAILNLAE AGDHIVSSAN LYGGTYNLFH
YTLPKFGVSV SFVDNPDDLD AWRAAVRPET RAFYGETIGN PRGDVFDTEG VAAVAHEAGI
PLIIDNTLAT PYLHRPFEHG ADIVVHSATK FIGGHGTSIG GIIVDSGRFD YGASGRFANF
TTPDPSYHGL VYWDALGHGS YIAKARVQLL RDLGPAVAPL NSFLFLQGLE TLSLRMERHS
ANAQRVAEWL RARDEVSWVA YPKLAGSPWY ERASRVLPRG AGAVLAFGIE GGAAAGRKFV
EGLELFSHLA NIGDVRSLVI HPATTTHSQL TDAEQAATGV TPDLIRLSVG IEGIDDILAD
LDAGFRAAKS G