Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4243 |
Symbol | |
ID | 5672598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5050990 |
End bp | 5052504 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641243116 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001508533 |
Protein GI | 158316025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.891003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTTT CCACCGACGT CGTCGGCGAC GGGCACCCGC CCGCCGCGGT CGGGTCACCA GGGGCGAGTA GCCAGCTCGA CCCGCGACGC TGGCTGGCGC TCAGCATCAT CGCGGTCGCC CAGCTCATGG TCGTGCTCGA CGCGTCGATC GTGACGATCG CCCTCCCGCA CGCCCAGAGC GACCTGGGCA TCTCCACCGC CAACCGGCAG TGGGTCATGA CCGCCTACAC CCTGGCGTTC GGCGGCCTGC TCCTGCTCGG CGGGCGCATC GCCGACTTCC TCGGACGCAA GAGGATCTTC ATCTGGGGGC TGGTCGGCTT CGCGGCCGCC TCGGCGCTGG GCGGCGCCGC CCCCAACGCC GAGTTCCTTT TCGCGGCCCG GGCCCTGCAG GGTGCCTGCG CGGCGCTCCT CGCCCCGGCG GCACTCTCCC TGATCACCGT CACGTTCACC GAGGGCAAGG AGCGCGCCCG CGCGTTCGGC GTCTACGGCG GGATCTCCGG TGGCGGCGCG GCGATCGGGC TCATCGTCGG CGGGCTGCTC ACCGAGTACG CGTCCTGGCG CTGGTGCCTG TTGGTCAACG TCCCGATCGC CCTCGCCACC GCCGCGGCCG CGCTGCCCAT CGTGCGGGAG AGCAAGGCCG AGGGCACGCC GAGCTACGAC ATCCCCGGCG CGGTGACCGT CACCACCGGC CTGCTCGCGC TCGTGTACGG GTTCACCGTC GCGGCCGACG ACGGCTGGGG CTCGGCGACC ACGATCGGCC TGCTCGCCGG CGCGGTGGCG CTGCTCGCGG TGTTCGTCGT GATCGAGATG CGCACGGCCG CCCCGCTGCT GCCGATGCGC GTGCCATTGG AGCGCAACCG AGGCGGCTCC TTCCTGGCGT CGCTACTCAT CGGCGGCGGC CTGTTCGCGA TGTTCCTGTT CCTCACCTTC TACTTCCAGT CGACGCTCGG GTACAGCGCG CTGCGCAGCG GCTTCGCCTT CCTCCCGTTC AGCGCGGGCA TCATCCTCTC GGCCGGTCTG GCCAGCCAGT TCCTCCCCCG GGTGGGGCCG ACGATACTAA TGATCATCGG CACCGCGCTG GCTGCCGGCG GGCTGGTCCT GCTTAGCCAG ATCGGGGCGG ACTCCAGCTA CGCGGGCCAC GTCCTGCCCG CCGAGGTCCT GATCAGCCTC GGGATGGGCC TCGCGTTCGT CCCGATGTCC AGCGTCTCCC TGCTGGGGGT CGCCGACCAC GACGCCGGTG TGGCGAGCGC GCTGGTCAAC ACCACCCAGC AGGTCGGCGG GTCACTCGGC GTCGCGCTGC TGAACACCGT GTACGCGACG GCGGTCTCGG ACTACCTGGG CTCGCACGGC ACCGGCGCGG CCGCGCAGCG GCAGGCGGCC ATCGAGGGCT ACACCACGTC GTTCGTATGG AGCGCCGTGC TCGTGGGGAT CGCCCTGGTC GCGGTGATCC TGCTGGTCCG TGCGGGCCGG GACGACGTCC CCGCGGTCGA CGGAGTGCCC GTCCACGCCG GATGA
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Protein sequence | MTVSTDVVGD GHPPAAVGSP GASSQLDPRR WLALSIIAVA QLMVVLDASI VTIALPHAQS DLGISTANRQ WVMTAYTLAF GGLLLLGGRI ADFLGRKRIF IWGLVGFAAA SALGGAAPNA EFLFAARALQ GACAALLAPA ALSLITVTFT EGKERARAFG VYGGISGGGA AIGLIVGGLL TEYASWRWCL LVNVPIALAT AAAALPIVRE SKAEGTPSYD IPGAVTVTTG LLALVYGFTV AADDGWGSAT TIGLLAGAVA LLAVFVVIEM RTAAPLLPMR VPLERNRGGS FLASLLIGGG LFAMFLFLTF YFQSTLGYSA LRSGFAFLPF SAGIILSAGL ASQFLPRVGP TILMIIGTAL AAGGLVLLSQ IGADSSYAGH VLPAEVLISL GMGLAFVPMS SVSLLGVADH DAGVASALVN TTQQVGGSLG VALLNTVYAT AVSDYLGSHG TGAAAQRQAA IEGYTTSFVW SAVLVGIALV AVILLVRAGR DDVPAVDGVP VHAG
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