Gene Franean1_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4232 
Symbol 
ID5672587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5039552 
End bp5040589 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID641243105 
Productaldo/keto reductase 
Protein accessionYP_001508522 
Protein GI158316014 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATC GATCTCTCGG CCGTACCGGT GTCTCGGTCA GCAAGCTGTG CCTCGGAGCC 
ATGATGTTCG GGCGTTGGGG AACCGAGGAT CACGACGAAA GCATCCGGAT CATCCATCGT
GCGCTCGATG CCGGCATCAC CTTCATCGAC ACCGCGGACG TCTACTCGCG GGGCGAGTCG
GAGACCATCG TCGGGAAGGC GCTGGCCGGT GGTCGGCGCG AGGACGTCAT CCTCGCCAGC
AAGGTCCACA TGCCGATGGG CGACGATCCC AACCAGCGGG GCAACTCGCG CCGCTGGATC
ATCCGCGAGG TCGAGGACTC GCTGCGGCGG CTCGGGACCG ACTGGATCGA CCTGTACCAG
ATCCATCGCT ACGACCCCGG CACCGATCTC GACGAGACGC TCGGCGCGCT CACCGACCTG
GTCCGGGCCG GAAAGGTCCG CTACGTCGGC CACTCGACGT TTCCGGTCTC CGCGATCGTC
GAGGCCCAGT GGACGGCGCG GGAGCGCGGC CGGGAGCGTT TCGTCTGCGA GCAGCCGCCG
TACTCGATCC TCACCCGCCG GATCGAGGTC GACGTCCTGC CGACCTGTGC CCGGTACGGG
ATGGGTGTGA TCCCGTACAG CCCGCTCGCC GGGGGCTGGC TCTCGGGCCG TTACAGCGCC
GGCGCGGACG CCGCGGCGCC GGCGTCCGAG GCGCGGCGGC GGCTCAGCGA CCGCTTCGAT
CTGACGCTGC CGGCCAACCG GCGCAAGCTG GACGCCGCCG AGCAACTCGC CAAGGTGGCC
GCCGAGGCGG GGATCAGCCT CATCGAGCTG GCGATCGCCT TCGTCCTACG CCATCCCGCG
GTGACCGCGG CGATCATCGG CCCGCGGACG ATGGACCATC TGGAATCCCA GCTGACCGCC
ACCGACATCG AGCTCTCCGA CGACGTCCTG GACCGCATCG ACGAGATCGT GCCCCCCGGT
ACGACCATCA ACCCCGCCGA CGACGGATGG GTCAGCCCGG CCCTGGCTGC TCCGGCACGC
CGCCGACCGG CGCGCTGA
 
Protein sequence
MEHRSLGRTG VSVSKLCLGA MMFGRWGTED HDESIRIIHR ALDAGITFID TADVYSRGES 
ETIVGKALAG GRREDVILAS KVHMPMGDDP NQRGNSRRWI IREVEDSLRR LGTDWIDLYQ
IHRYDPGTDL DETLGALTDL VRAGKVRYVG HSTFPVSAIV EAQWTARERG RERFVCEQPP
YSILTRRIEV DVLPTCARYG MGVIPYSPLA GGWLSGRYSA GADAAAPASE ARRRLSDRFD
LTLPANRRKL DAAEQLAKVA AEAGISLIEL AIAFVLRHPA VTAAIIGPRT MDHLESQLTA
TDIELSDDVL DRIDEIVPPG TTINPADDGW VSPALAAPAR RRPAR