| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4117 |
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| Symbol | |
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| ID | 5672475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4900559 |
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| End bp | 4902229 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242993 |
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| Product | TAP domain-containing protein |
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| Protein accession | YP_001508410 |
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| Protein GI | 158315902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAG ATGAGAAACG CACGCGGATG TGCGGTGTCG TTGTCGGCGC CGCGGCCCTC
GTCGGGGTCG GCTCCTTCAC CGGGCCGATC CCCGGGGCGC TGGCGGCGGA CGGCGCGCCC
GATCCCGCCC CGCCCGGTGT GGCGAGCCTG AACCCGGCCC TCGCCCCGTT CGAGAACCAG
CCGGTGCGCT GGCACGAATG CCGGACCGGC CCCAACGACG CGATCGGCTC CTATCTGGAC
GCGGCCGGCG CGCAGTGCGC CGGGATCAGC GTCCCGCTGG ACTACGCCCG CCCCGACGGC
CGGGAGATCA CCCTCGGGGT GTCCCGGATC AGGGCAGCCG ACACCGCCCA CCGGCGCGGC
ATTCTGATGA TCAATATTGG CGGTCCCGGC GGCCCTGCTC TGGACGCCAC CCCGGACCTG
CGTGGGCTGC TCGGTGCGGC GGCGGACGGC TTCGACGTGG TCGGGATGGA CCCTCGTTTC
GTCGGCCGCA GCGCACCGCT GGACTGCGGG CCGATCCTGA AGCGGCCCTG GCCGCGCGCC
GGCGGCCCCG CCCAGGACAG TTTCGATCGC ACCGCCGACG GTCAGGCCGC GATAGCGCAG
GCGTGCGCGG TGCACGCCGA TGTGCTGCCG TTCGCGTCGA CGCGGAACAC CGCTCGTGAC
ATGGATGTTG TCCGTGCTGC GCTTGATGAG CGGAAGACGT CGTTTCTTGG CTTTTCCTAC
GGCACCTACC TGGGTGCGGT GTACATGCAG ATGTTCCCTG ACCGGGTCGA TCGTTTCGTG
CTCGACAGCG CGGTGGATCC GGCGACGTAC AACCCGCGGG TGCTGCGCGA CACCGGGGAT
CTGCTCGAGG GCGCGCTGCG GGAGTGGGCC GGCTGGGCCG CCGGGCGGGA CGCCCAGTTC
GGGCTTGGCA GCACGGCCGC GGAGGTGCTG GCCACCGTTG ACCGGATCTA CGCCGCGGCC
GTGCGCGGTC CGCTGACCGT GGACGGCGTG GAGTACGACG CCGGGGACAT CCCGGGGCTG
CTCATTGATG CACTCGTCGA CGACAGCGCT GAGGCGTCCG ACGTCCTGGC GATGGGTGTG
CGGGCCTTCG CTGACGCGGC GGATGGCCGT GCCCCGGCGG AGAACCCCTA CCTCGACGAG
TTCTTGGACG GTGTCGCTAC CGGCGGTCCG ACGCTGCCCG GCGGGTCACC CGGGCGCCGG
GTGGAGGCGG TGCCGGCGGG GTCGATCAGC GCGTTCCAGA GCGCGCAGCT CGCGGTCCTG
TGCGGGGATG TGCCGGCGTC CCGTGTGGCC GGTGAGTACC TGGCGGACAT CCGCCGTCAT
CAGCGGGCGC AGCCGCATGT GGGTGCGGCG ATCTGGAACC TGACCCCGTG CACGTTCTGG
CCGGTGCGCC CGGTGGAGGC ACCGACCCGG GTGGCGAATG CTGTGCCCGC GCTGGTGGTG
GCCGCGGAGA AGGACAACCG CACGCCGTAC GCGGGCAGCC GGGCGCTGCA CCGGGCGTTG
TCCTCGTCGC GACTGGTGAC GTTGCGCGGA GCACGGGTGC ACGGCGTGTA CGGCGTGCGC
AGCGGCTGTG TCGACGACGC AGTCAATGCC TACCTGCGGT CGGGCACCCT GCCCAGCGCC
GACCTCACCT GCACCCGTCC GCCGGCTCCC CCGGGTTCGC TTCCGGAGTG A
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| Protein sequence | MRRDEKRTRM CGVVVGAAAL VGVGSFTGPI PGALAADGAP DPAPPGVASL NPALAPFENQ
PVRWHECRTG PNDAIGSYLD AAGAQCAGIS VPLDYARPDG REITLGVSRI RAADTAHRRG
ILMINIGGPG GPALDATPDL RGLLGAAADG FDVVGMDPRF VGRSAPLDCG PILKRPWPRA
GGPAQDSFDR TADGQAAIAQ ACAVHADVLP FASTRNTARD MDVVRAALDE RKTSFLGFSY
GTYLGAVYMQ MFPDRVDRFV LDSAVDPATY NPRVLRDTGD LLEGALREWA GWAAGRDAQF
GLGSTAAEVL ATVDRIYAAA VRGPLTVDGV EYDAGDIPGL LIDALVDDSA EASDVLAMGV
RAFADAADGR APAENPYLDE FLDGVATGGP TLPGGSPGRR VEAVPAGSIS AFQSAQLAVL
CGDVPASRVA GEYLADIRRH QRAQPHVGAA IWNLTPCTFW PVRPVEAPTR VANAVPALVV
AAEKDNRTPY AGSRALHRAL SSSRLVTLRG ARVHGVYGVR SGCVDDAVNA YLRSGTLPSA
DLTCTRPPAP PGSLPE
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