Gene Franean1_4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4104 
Symbol 
ID5672462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4888115 
End bp4889551 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content71% 
IMG OID641242980 
ProductNtaA/SnaA/SoxA family monooxygenase 
Protein accessionYP_001508397 
Protein GI158315889 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.958651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC GCACGCTCAA GCTGGGCGCC GTCCTCATCG GGGTCGGCGG CCCGGGGCAG 
CACAACACCT GGCTCAGCCC CGAGATCCCG GGCAACGCCA GCGTGGACGT CCGCTGGTAC
ATCGCCCGCG CGCAGCAGGC GGAGGCCGCG AAGTTCGACC ACGTCTTCAT CGTGGACAGC
CAGTTCATCA CCGCGGACTC GCCGAACCAC TACCTCAGCC GGCTCGAGCC GCTGACGCTG
CTGTCCGCGA TCGCCGTGCA CACCAGCCAC ATCGGCCTGG TGGGGACGAT CACCACCTCC
TACAACGAGC CGTTCAACGT CGCCCGGCGG CTCGCCTCGC TCGACCACAT CAGCGGCGGC
CGGGCCGGCT GGAACGTTGT CACCAGCGGT GACGCCGGGA CCGCGGGCAA CTACAGCCGC
GACGAGCACT ACGACTACGC CACCCGGTAC GGGCGGGCGC ACGAGCACGT CCGGATCGCG
CAGGGGCTGT GGGACTCTTA CGAGGCCGAC GCCTTCCCCC GGGACAAGGA CCGCGGCGTC
TTCTTCGACC GCGACCGCCA GCACGCGCTG AACCACAAGG GCGAGTACTT CTCGGTGGTC
GGGCCGCTCA ACCTCGAGCG CACCCCCCAG GGCCAGCCGG TGATCTTCCA GGCGGGTGAC
TCGGAAGAGG GCCGCGACCT GGGGGCGAGC ATCGCCGACG CGATCTTCAG CCACGCCCAG
ACCCTTGAGC AGGCACAGGC GTTCCGCAGC GAGCTGCGGG CGCGGGCGGC GACCAAGGGG
CGCGACCCCG AGCAGCTGCT CGTCATCCCG GGGATTTTCC CGATCATCGC CGACACGGAC
GAAGAGGCCC GCGCCAAGGA GGACGCGACC CTCGGCGCGA AGAGCTTCGA GCGGGCGCTG
GCCGAGCTCG GCCGTCCCTT CGGCTGGCAC GACTTCTCGC AGTACGACCT GGACGCACCG
TTCCCCGAGG TCGGCGACGC CGGCGAGCGC AGCTTTCGGA CCCAGGCGGA GGGGATCAAG
AAGCTGGCCC GGGACAACAA CCTCACGCTG CGCCAGGTGG TCGAACACCA GCTCACGGCG
TTCCGCTCGC CCTTCGTCGG CTCGCCGCGC ACCGTCGCGA ACGAGATCGA GCGCTGGTTC
GAAGACGGCG GCTTCGACGG CATCAACATC ATGGTGACGG TCCCCAGCGA GTTCGCCCTG
TTCGTCGACC AGGTGCTGCC GATCCTGCGT GAGCGTGGCG TCGCCCGCAG CGAGTACGAG
TCCACGACGC TGCGCGGCAA CCTCGGCCTG CCCGTCCCGG AGAACCGGCA CACCGCGGCC
CGCCGCCAGC AGCAGCACTC TGCCGCCGCC CCCACCGACG CCGCCGTCGC CGACAGCGCG
CCCGCACTCG ACGTCCCGCC GGCGCCCGCG GCCACGGAGT CGGCCCTCAT CTCCTGA
 
Protein sequence
MSARTLKLGA VLIGVGGPGQ HNTWLSPEIP GNASVDVRWY IARAQQAEAA KFDHVFIVDS 
QFITADSPNH YLSRLEPLTL LSAIAVHTSH IGLVGTITTS YNEPFNVARR LASLDHISGG
RAGWNVVTSG DAGTAGNYSR DEHYDYATRY GRAHEHVRIA QGLWDSYEAD AFPRDKDRGV
FFDRDRQHAL NHKGEYFSVV GPLNLERTPQ GQPVIFQAGD SEEGRDLGAS IADAIFSHAQ
TLEQAQAFRS ELRARAATKG RDPEQLLVIP GIFPIIADTD EEARAKEDAT LGAKSFERAL
AELGRPFGWH DFSQYDLDAP FPEVGDAGER SFRTQAEGIK KLARDNNLTL RQVVEHQLTA
FRSPFVGSPR TVANEIERWF EDGGFDGINI MVTVPSEFAL FVDQVLPILR ERGVARSEYE
STTLRGNLGL PVPENRHTAA RRQQQHSAAA PTDAAVADSA PALDVPPAPA ATESALIS