Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4098 |
Symbol | |
ID | 5672456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4883879 |
End bp | 4884826 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641242974 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001508391 |
Protein GI | 158315883 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGACC GGCAGCCGGA ACCTCGCGCC GCGAGCGGGG GAACCGGGCC CGGTGCGGCA CTCGGCCCGC TGTGGGAAAA TCCGCCGGCG CCGCCCAGAC CCGGGCTGAC CCGCGCGGCG ATCGTCGGAG CCGCCATCGG CATCGCCGAC CGCGAAGGGC TCGACGCGGT CTCCATCCGC CGGGTCGCGG CCGTGCTCGG CGCCCGGCCG ATGAGCCTCT ACACCCACGT CCCGAGCAAG GACGACCTGC TCGACCTCAT GACCGACCGG GTGGCCGGGG AGGCTGTCCT GACCGAGGCG CTGCCCACGG ACTGGCAGGC GGCGATGCGG GCCATCGCTG CCCGCAGCCG GGAAGTGGGC CTGCGCCATA CGTGGATGCT GCGGTCCGTC GTGAAACGCG GAAACATCGG CCCGAACGCC GTGCGACACA TCGAGCAGTC GTTCGAGGCC CTCACCGGCC TGCGGGTGGA GACCAGCCGC AAGATTGAAA TCCTGCGGGC CGTGGACACG TTCGTGATCG GGCACATCCT CGGGGAGGTC TCCGCGCGCA AGCGCGAGGG CCAACAGGCG TGCGCCGCCG ACGGCCCGGC CCCAGACCGC AGTTCGGCTC CAGACCAGAA CCTGGCCCCT GAGCGTCGCC TGGCCGCGGA GCAGGACCGG GCCCCGGCGC GGGCGGGTGG CGGCGGCGGG GACGAGCGCG ACCGTGGCAC GGGAGCGCCC GCGGTCGATC GCGCGGTGCC CGGCCTGCCG GCCGAACCGC GCTGGCAGGC CGTCGTCGAG CATCTGCACC AGCTCGCGGC GAGCGGACAG CACCCGGCGC TCGCCGAGGT GCTGACCGAA CCGCTCACGC TCTCGGGAGG GCATGCGGAC CGGGCCTTCG AGCAGGGCCT CGACTGGCTG CTGTCCGGCA TCGCCGCCGC CCTGCCACCA GACGCCGCCG CGGCCTGA
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Protein sequence | MDDRQPEPRA ASGGTGPGAA LGPLWENPPA PPRPGLTRAA IVGAAIGIAD REGLDAVSIR RVAAVLGARP MSLYTHVPSK DDLLDLMTDR VAGEAVLTEA LPTDWQAAMR AIAARSREVG LRHTWMLRSV VKRGNIGPNA VRHIEQSFEA LTGLRVETSR KIEILRAVDT FVIGHILGEV SARKREGQQA CAADGPAPDR SSAPDQNLAP ERRLAAEQDR APARAGGGGG DERDRGTGAP AVDRAVPGLP AEPRWQAVVE HLHQLAASGQ HPALAEVLTE PLTLSGGHAD RAFEQGLDWL LSGIAAALPP DAAAA
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