Gene Franean1_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4098 
Symbol 
ID5672456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4883879 
End bp4884826 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content75% 
IMG OID641242974 
ProductTetR family transcriptional regulator 
Protein accessionYP_001508391 
Protein GI158315883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACC GGCAGCCGGA ACCTCGCGCC GCGAGCGGGG GAACCGGGCC CGGTGCGGCA 
CTCGGCCCGC TGTGGGAAAA TCCGCCGGCG CCGCCCAGAC CCGGGCTGAC CCGCGCGGCG
ATCGTCGGAG CCGCCATCGG CATCGCCGAC CGCGAAGGGC TCGACGCGGT CTCCATCCGC
CGGGTCGCGG CCGTGCTCGG CGCCCGGCCG ATGAGCCTCT ACACCCACGT CCCGAGCAAG
GACGACCTGC TCGACCTCAT GACCGACCGG GTGGCCGGGG AGGCTGTCCT GACCGAGGCG
CTGCCCACGG ACTGGCAGGC GGCGATGCGG GCCATCGCTG CCCGCAGCCG GGAAGTGGGC
CTGCGCCATA CGTGGATGCT GCGGTCCGTC GTGAAACGCG GAAACATCGG CCCGAACGCC
GTGCGACACA TCGAGCAGTC GTTCGAGGCC CTCACCGGCC TGCGGGTGGA GACCAGCCGC
AAGATTGAAA TCCTGCGGGC CGTGGACACG TTCGTGATCG GGCACATCCT CGGGGAGGTC
TCCGCGCGCA AGCGCGAGGG CCAACAGGCG TGCGCCGCCG ACGGCCCGGC CCCAGACCGC
AGTTCGGCTC CAGACCAGAA CCTGGCCCCT GAGCGTCGCC TGGCCGCGGA GCAGGACCGG
GCCCCGGCGC GGGCGGGTGG CGGCGGCGGG GACGAGCGCG ACCGTGGCAC GGGAGCGCCC
GCGGTCGATC GCGCGGTGCC CGGCCTGCCG GCCGAACCGC GCTGGCAGGC CGTCGTCGAG
CATCTGCACC AGCTCGCGGC GAGCGGACAG CACCCGGCGC TCGCCGAGGT GCTGACCGAA
CCGCTCACGC TCTCGGGAGG GCATGCGGAC CGGGCCTTCG AGCAGGGCCT CGACTGGCTG
CTGTCCGGCA TCGCCGCCGC CCTGCCACCA GACGCCGCCG CGGCCTGA
 
Protein sequence
MDDRQPEPRA ASGGTGPGAA LGPLWENPPA PPRPGLTRAA IVGAAIGIAD REGLDAVSIR 
RVAAVLGARP MSLYTHVPSK DDLLDLMTDR VAGEAVLTEA LPTDWQAAMR AIAARSREVG
LRHTWMLRSV VKRGNIGPNA VRHIEQSFEA LTGLRVETSR KIEILRAVDT FVIGHILGEV
SARKREGQQA CAADGPAPDR SSAPDQNLAP ERRLAAEQDR APARAGGGGG DERDRGTGAP
AVDRAVPGLP AEPRWQAVVE HLHQLAASGQ HPALAEVLTE PLTLSGGHAD RAFEQGLDWL
LSGIAAALPP DAAAA