Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4079 |
Symbol | |
ID | 5672437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4861035 |
End bp | 4862447 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242955 |
Product | major facilitator transporter |
Protein accession | YP_001508372 |
Protein GI | 158315864 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0276069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCGC GGCAGCGGCT GGCGCTCGTG CTGCTGCTGG GGACGCAGTT CATGCTCGCG ATCGACTTCT CGATCCTCAA CGTGGCCCTG CCGTCAATCG GGGCGGGGGT CGGCCTCGGT GAGGGTGACC TGCAGTGGAT CGCGACCACG TTCGCGCTGC CCTCCGCCGG GTTCACCCTG CTGTTCGCGC GGGTCGCCGA CCTGGCCGGA CGGCGCCGGA TGTTCCTCAC CGGCCTGGTG CTGCTGATCG TGGCGTCCCT GCTCGGCGGG CTCGCCCAGG GGCCGACCGT GCTGCTGCTC GCCCGCGTCG GCCAGGGCCT CGCCGCCGCG ATCGCCATCC CGGCCGCGCT GTCCCTGCTG GTCACGACGT TCCCGGAGGG CCCCGTCCGG CAGCGTGCGC TCAGCCTCAA CGGTGCGCTG CTGCCCGCCG GCTTCACCGT GGGCGCGCTG GTGGGCGGGC TGCTGACCGG CTATCTCAGC TGGCGCTGGG CCTTCCTCGT CAACGTTCCG GTGGCGCTGG CGATCCTGCT CGCCGCGCCG CGGGTCGTCC CCGGTGGCCG CGCGGACGTC CGCCAGCGGC TCGACGTCCC CGGTGCGCTG ACCGTCACCG CCGGGCTGGT CGCCTTCGTC TACGGCATCT CCAGCGGCGG TGAGGACGGA TGGGGCCGGC CGTCGGTGTG GATCGCGGTG GCCGCGGGGC TCGTCCTGCT CGGCGCCTTC TGGCGGATAG AGGCGACCAG CCCGCATCCG CTGGCCTCGC TGGAGGTGCT GCGGCTGCGC CACGTCGGAT GGGGCAACCT CGGCGGGCTC GTGGTCTTCG CGATGGGCAG CTCGATCGTG TTCCTGATGA CGCTGTACCT GCAGCGGGTC CTCGGCTACT CGGCGGTGAC GACCGGGCTG ATCTTCGGGC TGCCCGGGAC GGCCGCGTTC GTGGCCGGAC TGGTGGCACC GCGCGTCCTG GCCGTCGTGG AACCACGCCG CACCCTGGTG CTCGGGCTGC TCGTCCAGGG CCTGTCCGCG CTGGCCCTGG CCTTCGTCGG GCTGGACCGC AGCTCGCTGT CGCTCGTGCT GGCGGCGTCC GTCGTCGGAT TCTTCGGCCA CGCCAGCGGG CTCGTCGCCT ACCTGGTGAC GGCGACCTCC GGGCTGCCCG ACACCCAGCA GGGCCTGGCC ACCGGCCTGA CGACGATGAC CCAGCAGGTG GCACTCACAC TGGGCATACC GATCATGAGC GCGGTGGCGA CCGCCCGGAC GTCCGCGCTC ACCGCGGGTG GCGACCACTC GGCGCGGGAG GCGACGCTGG GCGGCATCCA GACCGCGCTG GTCGTGAACG GGCTCGTCAC GATCGCCCTG GCCGCACTGA TCGCGACCGT CCTGCTCCGC CGCCGCCCGG GCCTCAGGAC AGCTGTGGTG TAG
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Protein sequence | MTPRQRLALV LLLGTQFMLA IDFSILNVAL PSIGAGVGLG EGDLQWIATT FALPSAGFTL LFARVADLAG RRRMFLTGLV LLIVASLLGG LAQGPTVLLL ARVGQGLAAA IAIPAALSLL VTTFPEGPVR QRALSLNGAL LPAGFTVGAL VGGLLTGYLS WRWAFLVNVP VALAILLAAP RVVPGGRADV RQRLDVPGAL TVTAGLVAFV YGISSGGEDG WGRPSVWIAV AAGLVLLGAF WRIEATSPHP LASLEVLRLR HVGWGNLGGL VVFAMGSSIV FLMTLYLQRV LGYSAVTTGL IFGLPGTAAF VAGLVAPRVL AVVEPRRTLV LGLLVQGLSA LALAFVGLDR SSLSLVLAAS VVGFFGHASG LVAYLVTATS GLPDTQQGLA TGLTTMTQQV ALTLGIPIMS AVATARTSAL TAGGDHSARE ATLGGIQTAL VVNGLVTIAL AALIATVLLR RRPGLRTAVV
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