| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4062 |
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| Symbol | |
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| ID | 5672420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4842202 |
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| End bp | 4842852 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242938 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001508355 |
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| Protein GI | 158315847 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0448793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.300284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCTG CCATGGAGAA GATCCGGGTG TTCGTTCTCG ATGACCACGA GATCGTGCGT
AATGGTCTGC GTCAGACGCT CGCCCGGCAT GACGATATCG AGGTCGTCGG AGAGGCCGGG
CTGGCCGCGG AGGCGTTGCG GCGGATTCCC GCGTTGCATC CGCATGTGGC GGTGCTGGAC
GGGCGGCTGC CTGATGGCAG TGGCATCGAC GTGTGCCGGG AGGTGCGGTC GGCGTTGCCG
GATGTGGCGT GCCTGATTCT GACCTCCTAT GACGACGACG AGGCGCTGTT CTCGGCGATC
ATGGCGGGTG CGGCGGGGTA CGTGCTGAAG GAGATCCGGG GCAACGACCT GGTGGGGGCG
ATCCGGACGG TGGCGTCGGG GCAGTCGCTG CTGGCGCCGT CGGTGACGCG GCGGGTGCTG
GAGCGGCTGC GGGACGGGCC GAGCGAGGAC CCGGCGATGG CGACGCTGAA CCAGCGGGAG
CGCGAGATCC TGCAGCTGAT CGCGGACGGG TTGACGAACC GGCAGATCGG CACGCGGCTG
GGCCTGTCGG AGAAGACGGT GAAGAACTAC GTGTCGAGCA TTCTGGAGAA GCTCGGCCTG
GCGAGCCGTA CGCAGGCCGC CGTCTACCTG ATGAAGCAGA GTGGGGAGTA G
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| Protein sequence | MVAAMEKIRV FVLDDHEIVR NGLRQTLARH DDIEVVGEAG LAAEALRRIP ALHPHVAVLD
GRLPDGSGID VCREVRSALP DVACLILTSY DDDEALFSAI MAGAAGYVLK EIRGNDLVGA
IRTVASGQSL LAPSVTRRVL ERLRDGPSED PAMATLNQRE REILQLIADG LTNRQIGTRL
GLSEKTVKNY VSSILEKLGL ASRTQAAVYL MKQSGE
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