Gene Franean1_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3980 
Symbol 
ID5672341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4766794 
End bp4767045 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content65% 
IMG OID641242859 
Productputative transposase 
Protein accessionYP_001508276 
Protein GI158315768 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.233268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCG GTCGTCACGG GGAGCGGCTC AACGGGTGGA TCGCCGCCGT CGACGCCGAT 
GACCTGTCCG AACTTCACCG CTTCACCCGC GGGCTCCTGC GCGACCACGA CGCCGTCCTC
AACGGGCTGA CCCTGCCGCA CAGCTCCGGA CAGGTCGAAG GCACCGTGAA CCGCATCAAA
ATGATCAAGC GGCAGATGTA TGGCCGGGCG AACTTCGACC TGCTCCGCAA ACGAGTTCTC
CTCGCGACCT GA
 
Protein sequence
MLTGRHGERL NGWIAAVDAD DLSELHRFTR GLLRDHDAVL NGLTLPHSSG QVEGTVNRIK 
MIKRQMYGRA NFDLLRKRVL LAT