Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3929 |
Symbol | |
ID | 5672290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4698392 |
End bp | 4699603 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242808 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001508225 |
Protein GI | 158315717 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.041846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAGG CGGTCATCTG CGAACCGGTG CGCACCGCGG TCGGGCGCTA CGGCGGTGCG CTCGCGGCGC TGAGCGCGCA GGCGCTCGGC GCGGCCGTGC TGCGCGGCCT GCTGGACCGG ACCGGCCTGC GGTCAGCGGA CATCGATGAC GTGATCTTCG GGTCGTGTTA TCCGACGATG GAGGCACCCG CGCTTGGCCG GGTGGTCGCC CTCGACGCCG GCCTCGACGT CACCGTCGCG GGCCTGCAGC TCGACCGCCG CTGCGGATCG GGCATGCAGG CGGTCACGAC GGCCGCGATG CAGGTCCAGA CCGGAGTGGC CGACGTCGTG ATCGCCGGGG GAGCGGAGAG CATGAGCAAC GCCCCCTTCT ACTCGACCCG GATGCGCCGG GGGTCGGGCG GCGGGGACGT CACGCTGCAC GACGCCCTGG CCCGCGGCCG GGTGACCGCG GGCGGCGCGA ACTTCCCCGT CCCGGGCGGG ATGATCGAGA CGGCGGAGAA CCTGCGGAGG GAGTACGGGA TCTCGCGCTC CGAGCAGGAC GAGTTCGCGC TGCGGTCGCA TGTCCGGGCC GTGGACGCGC AGGCCGCCGG TCGGTTCGCG GACGAGATCG TGTCGGTGTC GGTGCCGGGT CGCGGCGGTT CGGTCGTCGT GGACGTCGAC GAGCATCCCC GCGCCGACGC CAGCCTCGAC ACGCTCGCCG CGCTGCGCCC GATCATGGGT AGGACCGACC CGGAGGCCAC GGTCACTGCG GGCAATTCCA GCGGGCAGAA CGACGCGGCG TCGGCGTGTG TCGTCACCCA TCCGGAGGCG GCGAGGCGAC TCGGCCTGCG TCCGCTCGGT CGGCTGGTGA GCTGGGCGGT CGCCGGTGTG GAACCCGCGA GGATGGGGAT CGGACCCGTT GCGGCCACGG CGAAGGCGCT GGAGCGGGCG AACCTCAAGC TCGCCGACAT CGACCTGATC GAGCTCAACG AGGCCTTCGC GGCGCAGGTG CTCGCCTGCA CCCGGGAGTG GGGGCTCACG ACCGCGGACC TGGACCGGCT CAATGTCAAC GGTTCCGGGA TCTCGCTCGG TCATCCCGTC GCGGCGACCG GTGGCCGGAT CCTCGCGACC CTGCTTCACG AGATGGAGCG CCAGGACGCC CGGTACGGGC TGGAGACCCT GTGCATCGGC GGCGGCCAGG GGATCACCGC GATCTTCGAA CGGGTCGGCT GA
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Protein sequence | MREAVICEPV RTAVGRYGGA LAALSAQALG AAVLRGLLDR TGLRSADIDD VIFGSCYPTM EAPALGRVVA LDAGLDVTVA GLQLDRRCGS GMQAVTTAAM QVQTGVADVV IAGGAESMSN APFYSTRMRR GSGGGDVTLH DALARGRVTA GGANFPVPGG MIETAENLRR EYGISRSEQD EFALRSHVRA VDAQAAGRFA DEIVSVSVPG RGGSVVVDVD EHPRADASLD TLAALRPIMG RTDPEATVTA GNSSGQNDAA SACVVTHPEA ARRLGLRPLG RLVSWAVAGV EPARMGIGPV AATAKALERA NLKLADIDLI ELNEAFAAQV LACTREWGLT TADLDRLNVN GSGISLGHPV AATGGRILAT LLHEMERQDA RYGLETLCIG GGQGITAIFE RVG
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