Gene Franean1_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3912 
Symbol 
ID5672273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4678188 
End bp4678697 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content69% 
IMG OID641242791 
Productdehydratase 
Protein accessionYP_001508208 
Protein GI158315700 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.675333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0920236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGAA TTCAGCAGCG CGGGCTTTAT TTCGAGGAGC TGCAGACCGG CGCGATCTAC 
GTGCACAGCC CGGGCCGTAC CCTCGGCGAG GCGGACAACA CTTTGTTCTC CACCCTCACG
ATGAACCCGC AGAGCCTGCA TCTCGACGCC GCCGCGAGCG CGTCGACGGA ATTCGGTGAG
CGGCTCGTGA ACAGCATGAT GACCCTGTCG GTCATGGTCG GGCTGAGTGT CCCGCAGCTG
ACGCAGGGCA CGACGGTGGC GAACCTCGGC TTCGGCGCCA TCAGCTTCCC GGCGCCCGTT
CTCGCCGGCG ACACCATCTA CGCCGAGACC GAGGTCCTGT CGAAGCGGGA TTCCCGCTCG
CGGCCGGCGA ACGGCATCGT CGTCTTCGTG CACCGGGCCC GCAACCAGCG CGGTGTGCTC
GTCGCGCAGG CCGAGCGGAC CGCGCTGATG CTGCGCCTGC CGGCCGGCGA GGGCTCCGGC
GAGGAGCCTG CCGGCACGGA CGCCGGCTGA
 
Protein sequence
MTRIQQRGLY FEELQTGAIY VHSPGRTLGE ADNTLFSTLT MNPQSLHLDA AASASTEFGE 
RLVNSMMTLS VMVGLSVPQL TQGTTVANLG FGAISFPAPV LAGDTIYAET EVLSKRDSRS
RPANGIVVFV HRARNQRGVL VAQAERTALM LRLPAGEGSG EEPAGTDAG