Gene Franean1_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3876 
Symbol 
ID5672239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4606131 
End bp4606562 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content70% 
IMG OID641242754 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001508174 
Protein GI158315666 
COG category 
COG ID 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0335878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CACCGTTCGA CCCGCACGCC CTGCTCGCGC AGAGCCGGCT CGGCGTCCTG 
GCCACCATCA GATCGGACGG CCGTCCGCAG CTGTCGCCCG TCCTGCCGTT CTACGAGGAG
CAGTCCGGTG TGCTCTACGT GTCGATGACG GAGGGCCGGG CCAAGACGGC GAACCTGCGC
CGCAAGCCCT GGGCGGCGCT GGAGGTCACC AGCCCCGACG GCCGGTCGTG GGCGACCGCG
GAGGGCCCGG TCACCCTCAC CGGGCCGGGA GCGGACCCGC ACGGCTCCGA GGTCGAGGCC
CTGGTGAACT ACTACCGGGC CGCCGCCGGA GAGCATCCGG ACTGGCATGA GTACCGCTCG
GTCATGGTCT CCGAACGCAG GGTGCTCATG GCGATGACGG TCGAACACGT GTACGGACAA
CGCCTCGGCT GA
 
Protein sequence
MTDSPFDPHA LLAQSRLGVL ATIRSDGRPQ LSPVLPFYEE QSGVLYVSMT EGRAKTANLR 
RKPWAALEVT SPDGRSWATA EGPVTLTGPG ADPHGSEVEA LVNYYRAAAG EHPDWHEYRS
VMVSERRVLM AMTVEHVYGQ RLG