Gene Franean1_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3802 
Symbol 
ID5672166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4511200 
End bp4512177 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID641242681 
ProductATPase 
Protein accessionYP_001508101 
Protein GI158315593 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.136563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.371398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGC CGGCGACCGC GCCCGAAGCC ACCTGGTTCT GCGAGCGCTT CGAGACGCTG 
CAGAACAACA TCGGGCGATT CATCCGCGGT AAGACGGAGG TCGTCCGGCT CGCGCTGGTC
TGCATGGCGG CGGAGGGGCA CGTCCTCATC GACGACGTCC CGGGTGTCGG CAAGACATCC
ATCGCCAAGG CGATCGCGAA CTCCATCGAT GGCACCATGC GGCGGATCCA GTTCACCCCG
GACCTGCTGC CCACCGACGT CACCGGGGTG CAGATCTGGA ACAACGAGAC CCGCGAGTTC
GAATTCTCGC CGGGCGCGGT GTTCGGGAAC GTCGTGCTCA CAGACGAGAT CAACCGCGCG
TCGCCGAAGA CCCAGTCCGC CCTGTTGGAG GTCATGGAGG AACGCCAGGT CACCATGGAC
AGCGTCTCCT TCGCGGTGCC CCGCCCGTTC ATAGTGATCG CCACCCAGAA CCCGGTGGAG
CACGGCGGGA CGTATGACCT CCCGGAGGCC CAGATCGACC GGTTCATGGC CCGGCTGCAC
GTCGGCTACC CGCGGCATGA GGCCGAGGTG GAGATCCTGG TGAACCGGGC GAACGGGATG
TCGGCGGAGT CGCTCAGCCC GGTCGTGTCG ATCGCGGACA TGCAGCGGAT GATCGAGATC
GCGCGCCGAG TCCACCTGTC GCCCGCGCTG CTGAGCTACA TCGTGACGAT CACGGCCGCG
ACCCGCCGGA TGCCCGAGTT GCGGCTCGGG GTGAGCCCGC GGGGCGGGCT GGCCCTGACC
CAGGCGGCCC AGGCGAAGGC GGCCGCGGAC GGCCGGGCGT TCGTCACCCC GGACGATGTC
AAGGCGCTCG CGCCGTACGT CCTGGCGCAC CGGATGATCC TGCGTCCGGA GGCGGAGCTG
TCCGGCGCCA CCGCCGAGAG CCTGCTCGGT ACGATCACCG CATCGGTGCC GGTGCCGGAC
CAGCGCGCCT CCTATTAG
 
Protein sequence
MTSPATAPEA TWFCERFETL QNNIGRFIRG KTEVVRLALV CMAAEGHVLI DDVPGVGKTS 
IAKAIANSID GTMRRIQFTP DLLPTDVTGV QIWNNETREF EFSPGAVFGN VVLTDEINRA
SPKTQSALLE VMEERQVTMD SVSFAVPRPF IVIATQNPVE HGGTYDLPEA QIDRFMARLH
VGYPRHEAEV EILVNRANGM SAESLSPVVS IADMQRMIEI ARRVHLSPAL LSYIVTITAA
TRRMPELRLG VSPRGGLALT QAAQAKAAAD GRAFVTPDDV KALAPYVLAH RMILRPEAEL
SGATAESLLG TITASVPVPD QRASY