| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3709 |
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| Symbol | |
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| ID | 5672075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4392273 |
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| End bp | 4393031 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242592 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508012 |
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| Protein GI | 158315504 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.346062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA CCGACACCGC CGCCATCGTC ACCGGAGGGG CCTCCGGCCT CGGGGCCGCC
ACCGCCGCGG CACTCGCCGC GCACGGCGCC ACCGTCTTCG CGCTGGACCT GCCGGCGTCG
ATCGAGTCGG CACCGCCGGT CACCGGCATC ACCTACCTGG GGGCCGACGT GACCGTCGCC
GACCAGGTCG CCGCAGCCGT CGAGACCGCG GCCGGGTCCG GTGTGCCGCT GCGCGTCGTC
GTCAACTGTG CCGGCATCGG CCCCTCCCAG CGCATCCTCA GCCGGGGCCG GCGGCATGAC
CTCGACTTCT ACGCGAAGGT GATCCAGATC AACCTGGTCG GCACGTTCGC GGTGCTCTCC
ACCGCCGCCG CCGCGATCGC CGAGACCGAG CCGGACGACA ACGGCCAGCG CGGCGTCATC
ATCAACACCG CCTCCGTCGC CGCGTACGAG GGCCAGGTCG GCCAGGCGGC CTACGCGTCG
TCCAAGGGCG GCGTCGTCGG CCTCACCCTG CCCGCCGCCC GCGACCTCGC CCAGTACGGC
ATCCGGGTGT GCACGATCGC CCCTGGCATC GTCGAGACGC CGATGCTCGC CACCGTCTCG
GACGAGTTCC GCGCCGGTCT CGCCGCGTCG GTGCCGTTCC CACAGCGGCT CGCCCGGCCG
GACGAGTACG CCCAGCTGGC CCTGTCGATC ATCGACCACG ACTACCTCAA CGGCGAGGTC
ATCCGGATGG ACGGCGCGCT GCGGATGTCG CCGCGCTAG
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| Protein sequence | MKLTDTAAIV TGGASGLGAA TAAALAAHGA TVFALDLPAS IESAPPVTGI TYLGADVTVA
DQVAAAVETA AGSGVPLRVV VNCAGIGPSQ RILSRGRRHD LDFYAKVIQI NLVGTFAVLS
TAAAAIAETE PDDNGQRGVI INTASVAAYE GQVGQAAYAS SKGGVVGLTL PAARDLAQYG
IRVCTIAPGI VETPMLATVS DEFRAGLAAS VPFPQRLARP DEYAQLALSI IDHDYLNGEV
IRMDGALRMS PR
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