| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3685 |
|---|
| Symbol | |
|---|
| ID | 5672051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4362810 |
|---|
| End bp | 4363349 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641242568 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507988 |
|---|
| Protein GI | 158315480 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCA GTGCCGACGA CCTGAGCTTC GTCCTGGACC GTGAACAGAT CCGCGACCTC
CTCGCCCGGC TGGCCCGGGG CGAGGACCGG CGCGACGCGG ATCTGATCAG CGGGGCCTAC
TGGCCGGACG CGACCGACGA CCACGGCATC TTCCGCGGCA CGTTCAAGGA GTACCTGGCG
TGGGTCGTGC CCGGCGCGCC CTCGATTCCC GTCACCCTGC ACACGCTGGG CCAGACCCTG
ATCGACGTCA CGGGTGACAC CGCGGTGGCC GAGACCCACG TCACCTCCTA TCACCGGATC
GACTTCGGCG AGGAGGAGCA TGACGTCGTG ATCGGCGGCC GTTACGTCGA CCGGCTGGAG
AAGCGGGACG GGGAGTGGCG CATCGCGCAC CGCACCATGC TCTACGACTG GTTCCGGGAT
TTCGGGCAGT CGGTGGACTG GTCGCAGGGG GTCATGGGCA CCCCGTTCCT CGCCGACCAC
TACGTGGGCA GCGCGAACGG CGACCACAGC GTCACGTTGT TCCAGCAGAA ATCCCGCTGA
|
|---|
| Protein sequence | MSISADDLSF VLDREQIRDL LARLARGEDR RDADLISGAY WPDATDDHGI FRGTFKEYLA
WVVPGAPSIP VTLHTLGQTL IDVTGDTAVA ETHVTSYHRI DFGEEEHDVV IGGRYVDRLE
KRDGEWRIAH RTMLYDWFRD FGQSVDWSQG VMGTPFLADH YVGSANGDHS VTLFQQKSR
|
|---|
| |