Gene Franean1_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3648 
Symbol 
ID5672015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4324336 
End bp4324866 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content73% 
IMG OID641242532 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001507952 
Protein GI158315444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA CCAACCTTGC CGACCTCTAC GACCTCCCGC TGCTGGACTG GGCATCCGTC 
CAGGCCCGCC TCGCCGCCGG GATCGCCCAG GCCCCCGGCT CCGGCGGGCC CGACCGGCAT
ACCTGCTGGC TGACCACGAT CAATCCGGAC GGCGCCCCGC ACGTCACGGG CATCGGTGCC
CTGTTCGTCG ACGGCTGCTT CTGGTTCGAG ACGGGGGAAC GCACCCGTAA GGCCAGGAAC
CTCGCGCGCG ATCCGCGCTG CGCGCTGAGC GTGGCCACCG CCGAGTTCGA TGTCGTGCTC
GAGGGGCGGG CGAGCCGGGT CACCGATCCG GTGACCGTGG TGGCAATGGC CGAACGCTGG
GCCGCCGAGG GCTGGCCGGC CCGGGTGGAC GAGTCGGGAC AGGCCCTCAC AGCCGAGTTC
AGCGCTCCTT CGGCCGGCCC GCCGCCCTGG TTCGTGTACC GGGTCGGACC GACGGCCGCC
ACCGCGCTGC GGACCGTCGA GCCGGGTGGT GCCACCCGCT GGCGGTTCTG A
 
Protein sequence
MDATNLADLY DLPLLDWASV QARLAAGIAQ APGSGGPDRH TCWLTTINPD GAPHVTGIGA 
LFVDGCFWFE TGERTRKARN LARDPRCALS VATAEFDVVL EGRASRVTDP VTVVAMAERW
AAEGWPARVD ESGQALTAEF SAPSAGPPPW FVYRVGPTAA TALRTVEPGG ATRWRF