Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3568 |
Symbol | |
ID | 5671937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4230964 |
End bp | 4231725 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242454 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001507874 |
Protein GI | 158315366 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGCTG AACGATCGGG CGCCGGTGAT CCGGCCCGCA CACTGGCTCT GCTGTGGGGA GAGGCGTCGA CGGCATCCCG CCGGGGGCCG AGCCGGGCGC TGGACCTCGC CGCCGTGGTC AGGACCGCCA CCGATCTTGC CGACCAGGGG GGCCTCGCTG CGGTGACGAT GCGGGCCGTC GCCCGTGCCT TGGGCGTGGT CCCCATGACG CTCTACACCT ACCTGCCGGG CAAGGAAGAG CTGCTGGACC TGATGCTCGA CGCGGCCTAC GCACGGATGC CGCGCACGGA CACCGCCGGC GCGCCGTGGC GGGAGCGGCT CACCGCCGTC GCCGACGAGA ACCGCGCCCT GTTCGCCGCG CATCCCTGGG CAGCCGAGGT CTCCACCCTG CGCCCTCCCA TGGGGCCGGG CCTCATGGCC AAGTACGAGC ATGAACTGTC CGCCTTCGAC GCCCTCGGCC TCTCCGACAC CGAAATGGAC GACTGCCTGA CCTACCTGCT GTCCTTCGTC CAGGCCAACG CCCGTGCGGC CCGCGAAGCG ACCAGCGCGG CGGCTGGCCC CGACGGTGAC GACACGCGGT GGTGGGCGCG GGTCGGCCCC CTCCTGGCCC GCGTGCTGGA CGAGCAGCGC TATCCGCTCG CCAGCCGAGT CGGCACGGCC GCAGGCCAGG CACACGGCAG CGCCCACGAT CCCGACCACG CCTACCACTT CGGCCTTGCC CGTCTTCTCG ACGGCCTGGG CCCCCTCATC GAACGTTGCT GA
|
Protein sequence | MTAERSGAGD PARTLALLWG EASTASRRGP SRALDLAAVV RTATDLADQG GLAAVTMRAV ARALGVVPMT LYTYLPGKEE LLDLMLDAAY ARMPRTDTAG APWRERLTAV ADENRALFAA HPWAAEVSTL RPPMGPGLMA KYEHELSAFD ALGLSDTEMD DCLTYLLSFV QANARAAREA TSAAAGPDGD DTRWWARVGP LLARVLDEQR YPLASRVGTA AGQAHGSAHD PDHAYHFGLA RLLDGLGPLI ERC
|
| |