Gene Franean1_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3568 
Symbol 
ID5671937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4230964 
End bp4231725 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content73% 
IMG OID641242454 
ProductTetR family transcriptional regulator 
Protein accessionYP_001507874 
Protein GI158315366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCTG AACGATCGGG CGCCGGTGAT CCGGCCCGCA CACTGGCTCT GCTGTGGGGA 
GAGGCGTCGA CGGCATCCCG CCGGGGGCCG AGCCGGGCGC TGGACCTCGC CGCCGTGGTC
AGGACCGCCA CCGATCTTGC CGACCAGGGG GGCCTCGCTG CGGTGACGAT GCGGGCCGTC
GCCCGTGCCT TGGGCGTGGT CCCCATGACG CTCTACACCT ACCTGCCGGG CAAGGAAGAG
CTGCTGGACC TGATGCTCGA CGCGGCCTAC GCACGGATGC CGCGCACGGA CACCGCCGGC
GCGCCGTGGC GGGAGCGGCT CACCGCCGTC GCCGACGAGA ACCGCGCCCT GTTCGCCGCG
CATCCCTGGG CAGCCGAGGT CTCCACCCTG CGCCCTCCCA TGGGGCCGGG CCTCATGGCC
AAGTACGAGC ATGAACTGTC CGCCTTCGAC GCCCTCGGCC TCTCCGACAC CGAAATGGAC
GACTGCCTGA CCTACCTGCT GTCCTTCGTC CAGGCCAACG CCCGTGCGGC CCGCGAAGCG
ACCAGCGCGG CGGCTGGCCC CGACGGTGAC GACACGCGGT GGTGGGCGCG GGTCGGCCCC
CTCCTGGCCC GCGTGCTGGA CGAGCAGCGC TATCCGCTCG CCAGCCGAGT CGGCACGGCC
GCAGGCCAGG CACACGGCAG CGCCCACGAT CCCGACCACG CCTACCACTT CGGCCTTGCC
CGTCTTCTCG ACGGCCTGGG CCCCCTCATC GAACGTTGCT GA
 
Protein sequence
MTAERSGAGD PARTLALLWG EASTASRRGP SRALDLAAVV RTATDLADQG GLAAVTMRAV 
ARALGVVPMT LYTYLPGKEE LLDLMLDAAY ARMPRTDTAG APWRERLTAV ADENRALFAA
HPWAAEVSTL RPPMGPGLMA KYEHELSAFD ALGLSDTEMD DCLTYLLSFV QANARAAREA
TSAAAGPDGD DTRWWARVGP LLARVLDEQR YPLASRVGTA AGQAHGSAHD PDHAYHFGLA
RLLDGLGPLI ERC