| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3404 |
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| Symbol | |
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| ID | 5671775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4035225 |
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| End bp | 4036946 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242292 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001507712 |
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| Protein GI | 158315204 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.37903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGC TTGTCATCGA CCCGGTGTCG CGGATCGAGG GCCACCTGCG GGTCGAGGTG
CAGGTGGACG GCGGTCAGGT CACCGAGGCC TACGCGTCCT CGACGATGTG GCGCGGCATC
GAGACGATCC TGACCGGCCG GGACCCCCGG GACGCCTGGC TGTTCGCTCA GCGGATCTGC
GGTGTGTGCA CCTCGGTGCA CGCGCTGGCC TCGGTGCGGG CGGTGGAGGA CGCGGTCGGC
GCCGTCCCGC CGCTGAACGC CCGGCTGCTG CGGGACCTGA TCGCCACGTC ACTGTGTGTG
CACGACCATG TCGTCCACTT CTACCACCTG CAGGCCCTGG ACTGGGTCGA TCCGACCGCG
GCGCTCGCGG CCGACCCGGT GCGTGCCGCG GCGCTGGCGC AGTCCATCTC CGACTATCCG
CGGTCCACGG CCGGTCTGTT CGCCTCGGTG CAGACCCGGC TCAAGGTCTT CCTGGAAAGC
GGGAAGATCG GGCCGTTCAC CAACGGCTAC TGGGGGCATC CGGCCTACCG GCTGAGCCCG
GAGCTGAACC TGGTGGCGTT CAGCCACTAT CTCGACGCGC TGGACTTCCA GCGGGACTAC
ATCCGGGTGC ACGCCCTGCT CGGCGGAAAG AACCCGCACC CGCAGACCTA CGTGGTCGGC
GGAATGGCGT CCCCGATCGA CCTCAACAGC CAGGACGCCA TCAACGCGAA CACATTGCAG
GAGGTGACGC AGATCCTGCA GCGGGGCCTC GAATTCGTCG AGCAGGTCTT CCTGCCGGAC
CTGCAGGCGA TCGGCGCCGC CTATCCCGAG TGGACGACCT ACGGTCGGGG CCTGGGCTCC
TACATGGTGT TCGGTGACTA TTCACTGTCG CCGCCGGGCA TCGCCCGGCC ACCCCGGGAC
GGCCTTTTCC CCGGCGGGAT CATCCGGAAC GGGAACCTCG CGGTGAAACC GGAACCCTTC
GACCCGTCCG GTATCGCCGA GTCCGTCGCC CATTCGTGGT TCCGCTACGA CGATCCCGGC
GCCGCGCTGC CCCCCTGGAA GGGTGAGACG ACCCCGCAGT ACACCGGACC TGAACCCCCT
TTCGAGCAGC TCGACGTCGC CGGGAAGTAC ACCTGGCTGA AGGCGCCGCG CTACCAGGGA
GCGGCCATGG AGGTCGGCCC GGTGGCCCGC ATGCTCGTCG GCTACACCTC CGGGGACGCC
CGTATCCGCC CGCTCGTGCA GGGCGCGCTC GACGCCCTGC GACTGCCGCC CGAGGCACTG
ATGTCCACCC TCGGCCGGGT GGTGGCCCGC GGCCTGGAGA CCAGGCTGAT GGCGCAGTAC
TCCCTGGAGC TCGTCAACCG GCTGCGTGAC AACGTCGCCG CCGGCGACCT GGCCGTCGCC
GACACCGGGC GATGGCGTCC GACATCCTGG CCGGAGGGCG CCCTGCTCGG CGTCGGCTTC
CACGAGGCGC CCCGCGGGTC GCTGTCGCAC TGGGTCGTCA TCGAGGACGG CCGGATCCGC
AACTACCAGG CCGTGGTGCC CACCACCTGG AACGCCAGCC CCCGCGACGC GGAGGGGAAT
CCCGGCGCCT ACGAGGCCGC GCTAGTCGGC ACACCCGTCG CCGATCCCCA GCGGCCGCTG
GAGATCCTGC GCACCCTGCA CTCCTTCGAC CCCTGCATGG CCTGCGCGGC GCACATCTAC
GACGTCGAGG GCCGCGACAT CATCGAGGTG CGGGTCCAGT GA
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| Protein sequence | MSRLVIDPVS RIEGHLRVEV QVDGGQVTEA YASSTMWRGI ETILTGRDPR DAWLFAQRIC
GVCTSVHALA SVRAVEDAVG AVPPLNARLL RDLIATSLCV HDHVVHFYHL QALDWVDPTA
ALAADPVRAA ALAQSISDYP RSTAGLFASV QTRLKVFLES GKIGPFTNGY WGHPAYRLSP
ELNLVAFSHY LDALDFQRDY IRVHALLGGK NPHPQTYVVG GMASPIDLNS QDAINANTLQ
EVTQILQRGL EFVEQVFLPD LQAIGAAYPE WTTYGRGLGS YMVFGDYSLS PPGIARPPRD
GLFPGGIIRN GNLAVKPEPF DPSGIAESVA HSWFRYDDPG AALPPWKGET TPQYTGPEPP
FEQLDVAGKY TWLKAPRYQG AAMEVGPVAR MLVGYTSGDA RIRPLVQGAL DALRLPPEAL
MSTLGRVVAR GLETRLMAQY SLELVNRLRD NVAAGDLAVA DTGRWRPTSW PEGALLGVGF
HEAPRGSLSH WVVIEDGRIR NYQAVVPTTW NASPRDAEGN PGAYEAALVG TPVADPQRPL
EILRTLHSFD PCMACAAHIY DVEGRDIIEV RVQ
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