Gene Franean1_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3388 
Symbol 
ID5671759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4014505 
End bp4014921 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content67% 
IMG OID641242276 
Producthypothetical protein 
Protein accessionYP_001507696 
Protein GI158315188 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.809106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG CGCTCGCGCC CGAGATCTCA ACCTGGCCCG ACGAGCAGCC ACAGCTCATC 
GGTAGCCGTT GCGGCGACTG CAGCGCCACG ACGTTCCCCA CCCAGGCCCT CTGCCCTCGG
TGTAGCGGCG ACAAGATGAG CGACGAGCTG CTGCCCCGCC GCGGCACCCT CATCGCGTGG
ACGACGCAGG GCTTCGTCCC AAAGCTGCCC TACGCGGGTG GGGAGACGGC CAAGACCTTC
AAGCCGTTCG GTATCGGGCT GGTCCAGCTC GACGACGTGA TCCGCGTCGA GGGCCGGCTC
ACGGAGGCCG ACCCGCAGAA GCTGAAGTTC GGCATGGACG TCGAGTTGAC GATGGTGCCG
TTCTACACCG ACGCCGACGG CGACGAAGTG ATCACCTTCG CCTTCGCCCC AGCCTGA
 
Protein sequence
MQKALAPEIS TWPDEQPQLI GSRCGDCSAT TFPTQALCPR CSGDKMSDEL LPRRGTLIAW 
TTQGFVPKLP YAGGETAKTF KPFGIGLVQL DDVIRVEGRL TEADPQKLKF GMDVELTMVP
FYTDADGDEV ITFAFAPA