| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3299 |
|---|
| Symbol | |
|---|
| ID | 5671671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3911158 |
|---|
| End bp | 3911715 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641242188 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507608 |
|---|
| Protein GI | 158315100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG AGGACGAGCT CAAGGAACTG CGCCGCGAGG TCCAGTACGT CAAGGACCGT
GTCGCCATTC TCGACTGCAT CATGGCCCAG TCGCGCGGTC ATGACCGGCA CGATCTCGAG
CTGATGAGGA GTGTCTACCA CGAGGACGGA GTAGACGAGC ACGGGCCCGT CGTGAAGCTG
GGCCCCGAGT ACGGCGACTA CGCCAACAAG GCGCACGCAT CGGTCTTCGT CGACCACCTG
CACAACATCA CGACCCACAC CTGTGAGATC GACGGAGATG AGGCGCACTG CGAGAGCTAC
GTCATCGGGG CCATGCGTGC CCGCGACGGC AAGAGCGTGC ACCTCTTCGG AGGCCGCTAC
CTGGACCGTG TCGAGCGGCG GGACGGCGTG TGGCGGATCG CGCTGCGCCG CTGCACCCTC
GAGTGGACGA TGGCCGGCGA CACGTCGCTG CTGACCTCCG GGGCATTCGC CGGCTTCGTC
AAGGGCACGT GGGACAAGAG CGACCCGTCG TACGCGCGGC CGCAAGACCT GGAGAAGACT
CCGGTCGAGA GATGGTGA
|
|---|
| Protein sequence | MSIEDELKEL RREVQYVKDR VAILDCIMAQ SRGHDRHDLE LMRSVYHEDG VDEHGPVVKL
GPEYGDYANK AHASVFVDHL HNITTHTCEI DGDEAHCESY VIGAMRARDG KSVHLFGGRY
LDRVERRDGV WRIALRRCTL EWTMAGDTSL LTSGAFAGFV KGTWDKSDPS YARPQDLEKT
PVERW
|
|---|
| |