Gene Franean1_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3262 
Symbol 
ID5671636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3862855 
End bp3863694 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID641242154 
Producttransposase IS4 family protein 
Protein accessionYP_001507574 
Protein GI158315066 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC GTAAGACCTA CCCCAGCGAT CTGTCCGACG CCCGCTGGGA GCTGATCGCC 
CCCACCCTGC GCACCTGGCA GAAGGCCCGG CTCGACCGCC GGCCCACCGG ACAACCCGCC
CAGGTCGACC TCCGCGAGGT ATTCAACGCA ATCCTCTACC TCAACCGGAC CGGCATTCCC
TGGAGATACC TGCCCCACGA CTTCCCGTCG CACAACACCG TCTACTTCTA CTACGCCGCC
TGGCGCGACG AGGGCATTCT CGCCCGGCTC GGCTACACCC TGACCAGCCT GGCCCGCGCC
GCCGAGGGCC GCGAGCCGGA GCCGACCGCG TGCATCCTCG ACACCCAGAC CGTCAAGACC
TCCACCGACG TTCCCCTTGC CAGCCAGGGC ACCGACGCCG GCAAGAAGAT CGTCGGCCGG
AAGCGGGGCG TGGTCACCGA CACCCTCGGC CTGCTGCTCG CCGTGACCGT CACCGCCGCC
CACCTGTCCG ACAACGCTCT CGGCATACGC CTGCTCGACC AGGCCAAAAA CACCTGGCAG
TCCCTGTCGA AAACCTGGGT CGACAAGGGC TTCAAGAACA CCGTGGTCGA GCACGGTGCC
GCCCTCGGTA TCGATGTCGA GGTCGTTCCC AGAAAAACCG GGACCCGCGG CTTCCACGTC
GTCAAACGAC GTTGGGCCGT CGAACGCAGC CTGGGCTGGC TCATGCTGCA CCGCCGCCTG
GTCCGTGACT ACGAGACCCT CCCCGCCAGC TCCGAAGCGA TGATCCATAT CGTTATGATC
GACAACACGG CCAAGCGCAT AACGGGCGAG ACCACGCCCA CCTGGCGAGA CCCCCGCTAG
 
Protein sequence
MSPRKTYPSD LSDARWELIA PTLRTWQKAR LDRRPTGQPA QVDLREVFNA ILYLNRTGIP 
WRYLPHDFPS HNTVYFYYAA WRDEGILARL GYTLTSLARA AEGREPEPTA CILDTQTVKT
STDVPLASQG TDAGKKIVGR KRGVVTDTLG LLLAVTVTAA HLSDNALGIR LLDQAKNTWQ
SLSKTWVDKG FKNTVVEHGA ALGIDVEVVP RKTGTRGFHV VKRRWAVERS LGWLMLHRRL
VRDYETLPAS SEAMIHIVMI DNTAKRITGE TTPTWRDPR