Gene Franean1_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3210 
Symbol 
ID5671586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3787991 
End bp3788704 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content71% 
IMG OID641242104 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001507524 
Protein GI158315016 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.924727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA GTAACGAGTT CCGCGTCGAC GCGAGCCCGG CCACCACCTG GTCGGTCCTC 
ACCGACCTCG AACGCATCGC GCCCTGCCTG CCGGGAGCCC AGCTGCAGGA GGTGGAGGGT
GAGGAGTACC GCGGCATCGT GAAGGTCAAG GTCGGCCCGG TTTCCGCTCA GTACAAGGGC
ACCGCGGTCT TCCTCGAGCG TGACGAGTCG GCCCACCGGG CCGTCCTGAA GGCCGATGGC
CGGGAGACAC GTGGCCAGGG CAACGCGTCG GCGACGATCA CCGTGACGTT GACCCCTGAC
GGTGCCGGCA CCCAGGTCAA CGTGCTGACC GACCTGCGCA TCACCGGGAA GGTCGCCCAG
TTCGGTCGCG GAGTGATCAG CGACGTCAGC ACCAACCTGC TCGGGCGCTT CGCCGAGTCC
CTCGAATCGA CCGTACTCCG CGGCGACACC GCCCCGACGA CTGCGCCGGT AGCGGTCACG
GTGAGCGAGC CGGCCACACC GGCGCCGGCC GCGCCCGTCG TCCCCGGCCC CGGGCTCCCA
TCGGTACCCG CCGAGGCTGC TTCCGCCACG CGCGTCATCC ATCAGCCCGA GCCCGAGCCC
GTCAACCTGC TCGACACCGC CGGCGCACCG GTCGTCAAGC GCCTCGCCCC GGTTCTCGTA
GCCTTCCTCA TGGGCTGGCT GCTGAGCTCG CTGTTCCGCC GGGGGCGCGG CTGA
 
Protein sequence
MDLSNEFRVD ASPATTWSVL TDLERIAPCL PGAQLQEVEG EEYRGIVKVK VGPVSAQYKG 
TAVFLERDES AHRAVLKADG RETRGQGNAS ATITVTLTPD GAGTQVNVLT DLRITGKVAQ
FGRGVISDVS TNLLGRFAES LESTVLRGDT APTTAPVAVT VSEPATPAPA APVVPGPGLP
SVPAEAASAT RVIHQPEPEP VNLLDTAGAP VVKRLAPVLV AFLMGWLLSS LFRRGRG