Gene Franean1_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3170 
Symbol 
ID5671547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3736211 
End bp3736819 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content61% 
IMG OID641242065 
ProductTetR family transcriptional regulator 
Protein accessionYP_001507485 
Protein GI158314977 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.148676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCC AGGGCAAGCC GCGCGGCCCG TATCGCAAGG GTGTCGAACG GCGGGAGCAG 
ATCCTCCAGG TCGCTGCCGA GGTGTTCATC CAGAAGGGAG TCCGCGGTTC CTCCCTGCAG
GAGATCGCAG ACCGGGTAGG CGTAACCCAT ACCGCATTGC TACACTACTT TAAGTCACGA
GACGAGCTTC TCCTAGCCGT GGTGCGACAG CGCGATCTTT TCGGTCAAAA GATCGCCAGG
GAAGCGGACC CACGCAACGC ACTGACAGAG GCGATACGCA ACAATATGGA CCAACCTGGA
TTGATGCGTC TCTTTGTTGA ATCCTCCGCC GCCGCCACGG ACCCGTCACA TCCGGCGCAC
GAGTTCTACG CACGACGCTA CGAAGAGCTA TCGTCCTACA TCGTGTCTCG CCTGGCTGGA
CCAGTGGAGG CCGGACGGAT CCGCGGCGAC GTGCCACTCG AGGACGTTGC GCGCCTTCTG
CTCGCTGTGA TCGACGGTCT CCGGATGCAG TGGCTACTCA ACCCGGCGGT CGACATGGCC
AAACTCGCGG AGAGTTTTAT CCGCCTGTAC ATCACGTCAT CCACCCCGGA CACCTTCCCA
CCCCGTTGA
 
Protein sequence
MTSQGKPRGP YRKGVERREQ ILQVAAEVFI QKGVRGSSLQ EIADRVGVTH TALLHYFKSR 
DELLLAVVRQ RDLFGQKIAR EADPRNALTE AIRNNMDQPG LMRLFVESSA AATDPSHPAH
EFYARRYEEL SSYIVSRLAG PVEAGRIRGD VPLEDVARLL LAVIDGLRMQ WLLNPAVDMA
KLAESFIRLY ITSSTPDTFP PR