| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3164 |
|---|
| Symbol | |
|---|
| ID | 5671541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3728070 |
|---|
| End bp | 3729293 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641242059 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507479 |
|---|
| Protein GI | 158314971 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.932938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCGGC CGGTGGTGCG GACCGAGCGG CGGCAGGTGT TCGACCTGCC CGAGATGCGT
CCGCATGTGG TCGAACACGA GTTGGTCGAG CGGGAGTGCG GCTGCGGGAG GCGGACGCGG
GCTGCCGCGC CGGCGGGGGT GGATGCCCCG GTCCAGTACG GGCCGCGGGT CACCGCGGCG
GCGGTCTACC TGTACGCGGG CCAGTTCCTG TCCAAGGACC GGACCGCGAC CGCGCTGGCC
GAGCTCGTCG GGATCCCGCT GTCCGCCGGC ACGGTCGCGG TGATGACGCG CCGGGCTGCC
GCCGGCCTGG ACGGTTTCCT CACCACTGTC CGCGGTCTGC TCGCGGGCAG CGAGGTCCTC
GGGGCCGACG AGACCGGGCT GCGGGTCGCC GGGAAGCTGC ACTGGGTCCA CTGCGCCCGC
ACCGACAAGT ACACCCTGAT CGACTGCCAT CCGAACCGCG GGAGGGCCGG GATCGACACG
CTGGGAGTGC TTCCCGGCTT CGGTGGGGTC GTCGTCCATA ACGCCCGGGC GCCCTATGAC
AGCTACACCG ACGCGACCCA CCAGCTGTGT GTCGCTCACG TGCTACGCGA ACTACAGGCC
GTCGTCGAAG GCGCCCAGGC CGGGCAGTGG TGCTGGGCCG CCCAGGCCAC CGACGCGCTC
GTCGCCCTCC ACACGCAGAC CACCGAAGCA GCCGCCGCAG GCGCGGCCGG CCCAGATCTG
GCCGAGCTGG CCGCTCAGAC CCGGCTGCTG CGCCACGCCG CCCATATCGG GATCAGCCAG
ACCGCCGACC GGGACACGAA ACTCATGGCG GCCCGCCACG CGCTGGCCTG CCGCCTCGTC
GACCGCGAAG CCGACTACCT ACGCTTCACC CGGGACCTGC GGATACCGGC GGACAGCAAC
GGCTGCGAGC GCGACATCCG CATGATCAAA CTACGGCAGA AAGTATCCGG GTGCCTACGC
ACCCTGACCG GCGCCCGCCA GTTCCGCGCG ATCCGAAGCT ACCTGTCCAC CGTCACCAAA
CACGACCTCG GTTCTGTTCC ACGCCCTCGT CCAGCTGGCC GAAGGCCGCC CCTGGACGCC
CGCAACAGCC TGACCCCAAA CCAAAGATCA AAAAAGTACC TGACCAGTTA CATCGCCTCG
ACCCGAGAGC GTGAGACCGC TACTGCACCC ACCCGATCGG CGGGACGGGT TACCGACTAC
CAGCTAAGGT CAACGTCCAC TTAA
|
|---|
| Protein sequence | MGRPVVRTER RQVFDLPEMR PHVVEHELVE RECGCGRRTR AAAPAGVDAP VQYGPRVTAA
AVYLYAGQFL SKDRTATALA ELVGIPLSAG TVAVMTRRAA AGLDGFLTTV RGLLAGSEVL
GADETGLRVA GKLHWVHCAR TDKYTLIDCH PNRGRAGIDT LGVLPGFGGV VVHNARAPYD
SYTDATHQLC VAHVLRELQA VVEGAQAGQW CWAAQATDAL VALHTQTTEA AAAGAAGPDL
AELAAQTRLL RHAAHIGISQ TADRDTKLMA ARHALACRLV DREADYLRFT RDLRIPADSN
GCERDIRMIK LRQKVSGCLR TLTGARQFRA IRSYLSTVTK HDLGSVPRPR PAGRRPPLDA
RNSLTPNQRS KKYLTSYIAS TRERETATAP TRSAGRVTDY QLRSTST
|
|---|
| |