| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3148 |
|---|
| Symbol | |
|---|
| ID | 5671525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3704100 |
|---|
| End bp | 3704909 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641242043 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507463 |
|---|
| Protein GI | 158314955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03084] conserved hypothetical protein TIGR03084 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGTCT TGGACGATCT ACTGGCGGAC GTCGCAATCG AGAGCGACCG GCTCCGCACG
ACGGTGGCCA GCCTCGACAC GTCGGGCTGG CGAACCCCCA CACTGGCCGA GGGCTGGGAT
GTCGCTACCC AGATCGCCCA TCTGGCCTGG ACCGACGAGG CCGCTGTGGC GGCGGCGCGG
GCGACGAACG GCGATGCGAC GGGGTGGGAG ACGCTCGTGT CGCGGGCACG TGAGAACCCC
GCGCGCCTCG CGGACGATGA GGCGCTCGCT GGGGCGCAGG TCCGCCCGGA GGACCTTCTG
ACCCGGTGGG ATACCGCCCG GTTCGCGCTC GCTGAAGCCC TGCGGTCGGC CGCTGGCAGG
ATCCCATGGT TCGGGCCGTC GATGTCACCT GCCTCGATGG CGACCGCCCG GTTCATGGAG
ACGTGGGCGC ACGGGCTCGA CGTGACCGAT GCACTCGGCA TCGAGCCGGA GATCACCGAC
CGGATCAGGA ACGTGTGTCA CCTCGGCGTG CGCACTCGTG ACTTCGCTTA CACTGCGCGC
GGGCTTAAGT CGTCAACCGA AGAGATCCGT ATCGAACTCC TCGCCCCGAG TGGCGTGACG
TGGACTTACG GGTCCGAGGG TGCGGCGCAG CGTGTCAGCG GGCCGGCGTA CCACTTCGCA
CAGTTGGTTA CACAGCGTAT CCATCGCGAC GACACGGAGC TGATCGTTGT TGGAGAGGAC
GCCGAGCAGT GGCTGGAGAT CGCGCAGGCC TTCGCGGGCC CCCCGGGTGG AGGACGGCCG
CGGGCCGGAG CGAGCTCGGC TCGCTGCTGA
|
|---|
| Protein sequence | MSVLDDLLAD VAIESDRLRT TVASLDTSGW RTPTLAEGWD VATQIAHLAW TDEAAVAAAR
ATNGDATGWE TLVSRARENP ARLADDEALA GAQVRPEDLL TRWDTARFAL AEALRSAAGR
IPWFGPSMSP ASMATARFME TWAHGLDVTD ALGIEPEITD RIRNVCHLGV RTRDFAYTAR
GLKSSTEEIR IELLAPSGVT WTYGSEGAAQ RVSGPAYHFA QLVTQRIHRD DTELIVVGED
AEQWLEIAQA FAGPPGGGRP RAGASSARC
|
|---|
| |