Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3131 |
Symbol | |
ID | 5671509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3685915 |
End bp | 3686760 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641242028 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001507448 |
Protein GI | 158314940 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAGG ATGTGGCAAC AGTGGTCGGT TCCGTGGAAC GCAAGCAGGT TCCTCCACGC CGCCGGTTCA GCCAGCGACC GATCGACTTT TTGACGATGT TCGCTACGGT GGTGGTGGCC ATCGCCCTGT GGCACTTCGC CATCGCGTAT TTCGAGGTCG AACCGTACCT GTTTCCGGCG CCTCTTCCAG TCCTGAGGTC TCTCATCGAG GGCTTAGGTG ACGGCTCCCT TCTCTCCAAC GGATGGGTGA CTATGAAGGA GGTGTTGGTC GGTTTCAGCC TCGGATCGCT GCTGGCGATC AGCTTGGCGG TGATCATCAC GCGGTGGCGG TTCGTCGAGC GCACCTTCTA CCCGTTCATC GTGGCGTTCC AGACCATCCC GAAGATCGCA CTTGCACCGA TCATCATCAC GTGGATGGGC TTCGGCGAGG CCTCGAAGAT GCTCATGGCA GGCCTCCTGA CTCTGTTCCC CGTGCTCGTC AACACGATCA CCGGGCTGAA GTCCGTCGAG CAGGACCAGC TCGACCTCAT GCGAGCTCTC CAGGCCACTG AATGGCAGAT CTTCCGTTAC GTGCGGTTGC CGCGAGCCCT GCCCTACATA TTCGCCGGGC TCGAGATCTC CATTGTCTTC AGCGTGATCG GCGCCATCGT CGGGGAGTTC GTGGGCGCCG AGGCTGGACT CGGCTATCTG ATCCAGGCCA GTCAGGCCAC TTTGGACGCG ACCACCACCG TCGCCGTGCT CGTCGTCCTC TCGGTCATGG GACTCGTCCT GCACCGCATC GTGACCTTCG TGAAGAGCCG CGTCGTGTTC TGGCTCCGCG ACGACGACGC CGTCGTGGGC GTCTGA
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Protein sequence | MAQDVATVVG SVERKQVPPR RRFSQRPIDF LTMFATVVVA IALWHFAIAY FEVEPYLFPA PLPVLRSLIE GLGDGSLLSN GWVTMKEVLV GFSLGSLLAI SLAVIITRWR FVERTFYPFI VAFQTIPKIA LAPIIITWMG FGEASKMLMA GLLTLFPVLV NTITGLKSVE QDQLDLMRAL QATEWQIFRY VRLPRALPYI FAGLEISIVF SVIGAIVGEF VGAEAGLGYL IQASQATLDA TTTVAVLVVL SVMGLVLHRI VTFVKSRVVF WLRDDDAVVG V
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