Gene Franean1_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3131 
Symbol 
ID5671509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3685915 
End bp3686760 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID641242028 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001507448 
Protein GI158314940 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGG ATGTGGCAAC AGTGGTCGGT TCCGTGGAAC GCAAGCAGGT TCCTCCACGC 
CGCCGGTTCA GCCAGCGACC GATCGACTTT TTGACGATGT TCGCTACGGT GGTGGTGGCC
ATCGCCCTGT GGCACTTCGC CATCGCGTAT TTCGAGGTCG AACCGTACCT GTTTCCGGCG
CCTCTTCCAG TCCTGAGGTC TCTCATCGAG GGCTTAGGTG ACGGCTCCCT TCTCTCCAAC
GGATGGGTGA CTATGAAGGA GGTGTTGGTC GGTTTCAGCC TCGGATCGCT GCTGGCGATC
AGCTTGGCGG TGATCATCAC GCGGTGGCGG TTCGTCGAGC GCACCTTCTA CCCGTTCATC
GTGGCGTTCC AGACCATCCC GAAGATCGCA CTTGCACCGA TCATCATCAC GTGGATGGGC
TTCGGCGAGG CCTCGAAGAT GCTCATGGCA GGCCTCCTGA CTCTGTTCCC CGTGCTCGTC
AACACGATCA CCGGGCTGAA GTCCGTCGAG CAGGACCAGC TCGACCTCAT GCGAGCTCTC
CAGGCCACTG AATGGCAGAT CTTCCGTTAC GTGCGGTTGC CGCGAGCCCT GCCCTACATA
TTCGCCGGGC TCGAGATCTC CATTGTCTTC AGCGTGATCG GCGCCATCGT CGGGGAGTTC
GTGGGCGCCG AGGCTGGACT CGGCTATCTG ATCCAGGCCA GTCAGGCCAC TTTGGACGCG
ACCACCACCG TCGCCGTGCT CGTCGTCCTC TCGGTCATGG GACTCGTCCT GCACCGCATC
GTGACCTTCG TGAAGAGCCG CGTCGTGTTC TGGCTCCGCG ACGACGACGC CGTCGTGGGC
GTCTGA
 
Protein sequence
MAQDVATVVG SVERKQVPPR RRFSQRPIDF LTMFATVVVA IALWHFAIAY FEVEPYLFPA 
PLPVLRSLIE GLGDGSLLSN GWVTMKEVLV GFSLGSLLAI SLAVIITRWR FVERTFYPFI
VAFQTIPKIA LAPIIITWMG FGEASKMLMA GLLTLFPVLV NTITGLKSVE QDQLDLMRAL
QATEWQIFRY VRLPRALPYI FAGLEISIVF SVIGAIVGEF VGAEAGLGYL IQASQATLDA
TTTVAVLVVL SVMGLVLHRI VTFVKSRVVF WLRDDDAVVG V