Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3073 |
Symbol | |
ID | 5671452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3627584 |
End bp | 3628687 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641241971 |
Product | transposase IS4 family protein |
Protein accession | YP_001507391 |
Protein GI | 158314883 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCATCAT GCCAGCAATC TCCCGCCGTG TCGAACCTTC GGATCAGCGG TGAGGGGGAC GACATCTCCG GTCTGCTCGC GATGCTAGGC GGGATCACCG ACCCACGGAA AGCGCGCGGG AAGATCTACA GCCTTTCGTT CATGCTGGCC TCCGCGCTTG TCGCGACGTT GGCTGGGGCG ACAGGCCTGC GTGAGATCGG CAGCCGGGTC GCTGACTTCG GCCAAGATCT CCTGGCCCGG CTCGGTGCAC CGTTCGACCA TTTCACTGGA AGATATAGGG CGCCCAGCGA AAAGGCGATC CGCGCTCTGT TCGAGAAGAT GGACGTCGCG GCCGTCGACG CCGCCTTCGG TGCCTGGTTG TTCGCGCACG CGGTCTGGGA GCCGGGTGAG GACATCGTCC TCGCCATGGA CGCGAAGGTC CTGCGTGGAG CCTGGTCCGA GGGGAACAAG CAGGTCACGC TCCTGTCTGC CATGGTCCAC GCGAAGGGGC TCGTCGCCGG GCAGGTCCGC GTCCCCGACG GCACGAACGA GATCACCCAG GTAGCGGCTC TCCTGGAGAA CCTCCCGGAC ATCTCCGGGC CTGTCGTCGC GACGTTGGAT GCCGTGCACA CCCAGCACGA AACCGCCTTC CTCCTTGTCG AACACGGAAT CGACTACGCG CTGACCGTGA AGGGAAACCA GCCGACGCTC TACCGGAAAA CCTTCGAGCA AACCCTTCCC CTTCTCCAAA AACCCCCACA GCACGAAGTC GAGGAACGCG GCCACGGCCG AATCAAGAAA TGGCAGGCCT GGACCACCGA AGCCAAGGGG ATCGGGTTTC CGGAGGTCGC GACCGCTGCC GTCATCCGTC GCGACGAATT CGACCTCAAG GGAATCCGTG TCAGCCGTGA ATACGCTCAC ATTCTCACCA GCGTCGCCGG CAACCGCGCC ACTGCCGCCT ACATTCACAG GCTCATCCGC GGGCATTGGG GCATCGAGAA CGAAATTCAC TACCCGCGCG ACACCGCGTG GCGCGAGGAC GCCAACCAGA CCCACACAGG AAATAGTCCA CACACGCTCG CCAGCTTCCG TAACCTGGCG GTAACTGGTC AGGTACCGAT TTGA
|
Protein sequence | MPSCQQSPAV SNLRISGEGD DISGLLAMLG GITDPRKARG KIYSLSFMLA SALVATLAGA TGLREIGSRV ADFGQDLLAR LGAPFDHFTG RYRAPSEKAI RALFEKMDVA AVDAAFGAWL FAHAVWEPGE DIVLAMDAKV LRGAWSEGNK QVTLLSAMVH AKGLVAGQVR VPDGTNEITQ VAALLENLPD ISGPVVATLD AVHTQHETAF LLVEHGIDYA LTVKGNQPTL YRKTFEQTLP LLQKPPQHEV EERGHGRIKK WQAWTTEAKG IGFPEVATAA VIRRDEFDLK GIRVSREYAH ILTSVAGNRA TAAYIHRLIR GHWGIENEIH YPRDTAWRED ANQTHTGNSP HTLASFRNLA VTGQVPI
|
| |