Gene Franean1_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3047 
Symbol 
ID5671426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3582011 
End bp3582889 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID641241945 
ProductABC transporter related 
Protein accessionYP_001507365 
Protein GI158314857 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA ACACCATCAC CGATCTTGCG GAGGCGAGAG ACGTACCCAC TCCTGCTCCG 
CCGCCCGGCG GCTCACGCCT CCGCGTGGAG TCGGCGACGA TCGGTTACGA CAAGCGCATC
ATCAGCGAGG GCTTGTCGGT GTCCATTCCG GACGAGTCGT TCACAGTCAT CGTGGGCCCG
AACGCGTGCG GGAAGTCCAC TCTGCTGCGC GGCCTGTCGC GGCTGTTGAA GCCGTCCGCG
GGTCAGGTGG TCCTCGACGG TGTAGCTATC CAGTCGTACA AGACGAAGGA GGTGGCGCGG
CGGGTCGGCC TGCTGCCGCA GACCTCGATC GCCCCGGACG GGATCACCGT AGCCGACCTG
GTGGCTCGGG GCCGGTATCC GTATCAGGGG TTCATCCGGC TGTGGACCGA GGCCGACGAG
CGGGCCGTAG TCAGGGCGAT GGACCAGACC GCGGTCACCG ACCTGTCGGG CCGCTTGGTG
GACGAGTTGT CGGGAGGCCA GCGACAGCGG GTGTGGGTGG CGATGGCGCT CGCGCAGCAC
ACCAGCATCC TGCTGCTGGA CGAGCCGACC ACCTTCCTCG ACATCACCCA TCAGATCGAA
CTGATGGAGC TGTTCACCGA CCTGCACCAC GTCGGCCACA CCCTGGTCGC CGTGCTGCAC
GACCTGAATC ATGCTGCTCG CTACGCCACG CACTTGATCG CCATGAAGGA CGGCGCCATG
GTCGCCGAGG GGCCACCGTC GGAGATCGTG ACGGCCGAGC TGGTCGAAGA GGTGTTCGGT
TTGCGCTGTC TGGTGGTGCC CGATCCGGTA GCGGGCACTC CTCAGGTGGT GCCGCTGGGC
CGTGACCGCG GTGGCGAAGG CGTGCGGGAG GGCCGTTGA
 
Protein sequence
MNTNTITDLA EARDVPTPAP PPGGSRLRVE SATIGYDKRI ISEGLSVSIP DESFTVIVGP 
NACGKSTLLR GLSRLLKPSA GQVVLDGVAI QSYKTKEVAR RVGLLPQTSI APDGITVADL
VARGRYPYQG FIRLWTEADE RAVVRAMDQT AVTDLSGRLV DELSGGQRQR VWVAMALAQH
TSILLLDEPT TFLDITHQIE LMELFTDLHH VGHTLVAVLH DLNHAARYAT HLIAMKDGAM
VAEGPPSEIV TAELVEEVFG LRCLVVPDPV AGTPQVVPLG RDRGGEGVRE GR