Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3018 |
Symbol | |
ID | 5671400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3552596 |
End bp | 3554455 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641241920 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001507340 |
Protein GI | 158314832 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.238191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGGC TGCCAGGGGA GGAGTCGTTC ATGGGGCACT ACCGGAGCAA TCTCCGCGAC ATCGAGTTCA ACCTGTTCGA GGTGTTCGGC GTGGACCGGA CGCTCGGGAC CGGGCCCTTC GCGGAGATGG ACCGCGACAC AGCGCATGAG GTGCTCGCCG AGCTGGAGCG GGTCGCCGTC GGGCCGATCG CCGAGTCCTT CGAGGACGCC GACCGGCACC CGCCGACACT CGACCCCGCC ACCGGCACCG TCACACTGCC CGAGTCGTTC CGCAAGTCCT TCGCGGCGGC GCAGGAGGGC GAGTGGTGGC GGCTCTACCT CCCGCCGCAC CTGGGCGGCA TGGGTGCCCC GCCGACCATC GCCTGGGCGG CGTCCGAGCT GCTCCTCGGG GCGAACCCGG CGGTGTTCAT GTACATGGCC GGGCCGACGT TCGCCGCGAT CCTCGAGGGC ATCGGCACGC CATGGCAGAA GAAGATCGCG AACTGGGCCA TCGAGCGGCA CTGGGGCGCG ACCATGGTGC TGACCGAGCC GGACGCCGGC TCCGACGTCG GCGCAGGCCG GGCGCGGGCC GTCGAGCAGC CGGACGGCAC CTGGCACATC GAAGGTGTGA AGCGCTTCAT CACCAGCGGT GACTGGGACA TCCCGGAGAA CATCTTCCAC CTGGTGCTCG CCCGCCCCGA GGGGCACGGC CCCGGCACCA AGGGCCTGTC GATGTTCGTC GTGCCCAAGT ACCTGCCCGA CCCGGAGACC GGCGCCCCGG GCGCCCGCAA CGGTGCCTAC GTCACGAACC TTGAGAAGAA AATGGGCCTG AAGGTCTCGA CCACCTGCGA GCTGCGCTTC GGCGAGCGTG AGCCGGCCGT CGGATGGCTC GTCGGCGACG TCCACGACGG CATCGCGCAG ATGTTCCGGG TCATCGAGTA CGCCCGGATG ATGGTCGGCA CGAAGGCGAT CGCCACGTTG TCCACCGGGT ACCTCAACGC GCTGGCCTTC GCCCGCGAGC GGATCCAGGG CGCCGACCTG ACCCGGGCGT CGGACAAGAC CGCGCCGCGG GTGGCCATCA TCAACCATCC CGACGTGCGC CGGATGCTCA TGCAGCAGAA GGCCTACGCG GAGGGGATGC GTGCCCTCGT GCTGTACACC GCTACCTTCC AGGACGCCGT CACGCTGGCG GCGGCCCGCG GCGAGGTGGA CGACAACGCG GTGCGGATGA ACGACCTGCT GCTCCCGATC GTGAAGGGAG TCGGCTCGGA GCGCTCCTAC GAACTGCTGG CGAGCTCGCT GCAGGTCCTC GGCGGCTCCG GATACCTGCA GGACTACCCG ATCGAGCAGT ACATCCGCGA CGCGAAGATC GACACCCTGT ACGAGGGCAC GACGTCCATC CAGGGCCAGG ACCTCTTCTT CCGGAAGATC GTCCGGGACA AGGGTCGGGC GCTGACCACT CTGTTCACGC AGGTCCAGGA GTTTGTGAAG GGCGAGGCGG GCAACGGCGC GCTCCGCGCG GAGCGGGAGT CGCTGGGCGC GGCGCTCGAC GAGTGCCAGG CCATGGTCGG TTCGATGGTC GGGTTCCTCA CCGCCACCGC CCAGGACAAG TCCCAGGTCT ACCGGGTCGG GCTGAACACC ACGCGGCTGC TGATGAGCAT CGGCGACCTC GTCGTCGGCT GGCTGCTGCT GCGCGGTGCC GACGCGGCGC TACGCGGGCT GGACGGCTCC CCGTCCGAGC GCGACCGGGC GTTCTACGAG GGCAAGATCG CGGCCGCGCG CTGGTTCGCG GCCAACATCC TGCCGGAGCT GCGCACACGC CGGACGGTGC TGGAGGGCAC CGGTCTCGGG CTGATGGAGA TGTCCGAAGC GGCGTTCTGA
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Protein sequence | MPRLPGEESF MGHYRSNLRD IEFNLFEVFG VDRTLGTGPF AEMDRDTAHE VLAELERVAV GPIAESFEDA DRHPPTLDPA TGTVTLPESF RKSFAAAQEG EWWRLYLPPH LGGMGAPPTI AWAASELLLG ANPAVFMYMA GPTFAAILEG IGTPWQKKIA NWAIERHWGA TMVLTEPDAG SDVGAGRARA VEQPDGTWHI EGVKRFITSG DWDIPENIFH LVLARPEGHG PGTKGLSMFV VPKYLPDPET GAPGARNGAY VTNLEKKMGL KVSTTCELRF GEREPAVGWL VGDVHDGIAQ MFRVIEYARM MVGTKAIATL STGYLNALAF ARERIQGADL TRASDKTAPR VAIINHPDVR RMLMQQKAYA EGMRALVLYT ATFQDAVTLA AARGEVDDNA VRMNDLLLPI VKGVGSERSY ELLASSLQVL GGSGYLQDYP IEQYIRDAKI DTLYEGTTSI QGQDLFFRKI VRDKGRALTT LFTQVQEFVK GEAGNGALRA ERESLGAALD ECQAMVGSMV GFLTATAQDK SQVYRVGLNT TRLLMSIGDL VVGWLLLRGA DAALRGLDGS PSERDRAFYE GKIAAARWFA ANILPELRTR RTVLEGTGLG LMEMSEAAF
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