| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2768 |
|---|
| Symbol | |
|---|
| ID | 5671157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3277678 |
|---|
| End bp | 3278496 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641241677 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507097 |
|---|
| Protein GI | 158314589 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGGTG TGGGAGTGGG GCGGGCGCGG CTGGCGGTGC TCATCGACGC CGACAATGCG
CAGGCGTCGC TCGTCGAGCA CGTGCTGGCG GAGGTCGCGA TGTTCGGCAC CGCCCATGTC
AAGCGCGCCT ATGGCGACTG GACCAGCACC CATCTGCGGA GCTGGAAGGA CCAGCTGCTC
GCCCACTCGA TCCAACCGAT CCAGCAGTTC GCCCACACCA GCGGGAAGAA CGCGACGGAT
GCGGCGATGG TGATCGACGC GATGGATCTG CTCTACGGCG CGGAACTGGA CGGATTCTGT
TTGATCTCTT CCGACAGCGA CTTCACCCGG CTGGCCTCCC GGCTGCGGGA GTCAGGTCGG
ATCGTCTACG GCTTCGGGGA ACGCAAGACC CCGCGGTCAT TCGTCGCGGC CTGCGACACC
TTCACCTACG TCGAGAACCT GGCACCAGCG GCACCGGCGC CGGCCGATCC ATCCGCTGCC
CGGCCGGCCG AGGCCACGCC CGTGGGTGAC GTCGTGACGG CCGCCGCGCG CCAGCCGATC
CCCGGCTCCC GACTGCGCAG TGACACGAAG CTGGTGACCC GGCTGCGCGA CGCCGTCGAG
GAGGCGTCCG ACGACGACGG CTGGGCCAGC CAGGCACGGG TCGGCACCAT CATCCGCAGG
CGGACCCCGG ACTTCGACCC CCGCGACTAC GGCTACCGGA GACTGGGCGA GCTGATCACC
GCGATCGAGC TGTTCGAGGT CGAACGCCGT TCCAACAGCG GGGGTAAACC GACCCTCGTC
TACCTGCGCG ACCGGCGCCG CCGCACACCG ACCGGCTAG
|
|---|
| Protein sequence | MDGVGVGRAR LAVLIDADNA QASLVEHVLA EVAMFGTAHV KRAYGDWTST HLRSWKDQLL
AHSIQPIQQF AHTSGKNATD AAMVIDAMDL LYGAELDGFC LISSDSDFTR LASRLRESGR
IVYGFGERKT PRSFVAACDT FTYVENLAPA APAPADPSAA RPAEATPVGD VVTAAARQPI
PGSRLRSDTK LVTRLRDAVE EASDDDGWAS QARVGTIIRR RTPDFDPRDY GYRRLGELIT
AIELFEVERR SNSGGKPTLV YLRDRRRRTP TG
|
|---|
| |