Gene Franean1_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2724 
Symbol 
ID5671115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3222481 
End bp3223230 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID641241636 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001507056 
Protein GI158314548 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.891783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG ACGTCGAGCG GCGCGGCCCG GTGACCGTGG TCACCATCAA CCGCCCGCAG 
GCCGCCAACG CCCTGGACGG CCCGACCATG TCCGGGCTCG GCCACGCCTT CGAGCAGGCG
GAGAAGGAAG ACGACGTCCG CGCCGTCATC CTGACCGCCG CCGGTGACCG CACCTTCTGT
GCCGGCATGG ATCTGAAGGC CTTCCTGACA GGCAGCATCT CCGACATCTC CGGCCCCGGG
ATCGGCATCT TCACCAAGCG GACCTTCCCC AAGCCGATCA TCGGAGCGAT CAACGGCACG
GCCCTCGGCG GGGGCTTCGA GCTGGCGCTG GGCTGCGACC TGCTCGTGGC CGCTGAGACC
GCCAGGTTCG GCCTGCCGGA GGTCAGCCGC GGGCTGATCG CCGCGGGTGG GGGAACCCGG
CTGCCGCAGC GGATCCCCCT CGCCCTGGCA CTCGAGCTCG GGCTGACCGG CGCCATGGTC
AGCGCGGCCA GACTGGGCGA GATGGGCCTG GTCAACCGGG TCGTACCGGC CGCGGAGGTG
CTCTCCACCG CGCTCGACCT GGCCGGTCAG ATCGCCGCGA ACGGTCCACT CGCCGTGCGG
GTCACCAAGG AGCTGATGGT CGGCGAGCTG GCCGCCGCCG ACTGGGATGG CATCTCGGCG
GCCGTGGCGC CGGTGTTCGG CAGTGCGGAC GCCCGTGAGG GGGCGCGCGC GTTTGCCGAG
AAGCGCGCAC CCCGCTGGAT CGGCCGCTGA
 
Protein sequence
MSVDVERRGP VTVVTINRPQ AANALDGPTM SGLGHAFEQA EKEDDVRAVI LTAAGDRTFC 
AGMDLKAFLT GSISDISGPG IGIFTKRTFP KPIIGAINGT ALGGGFELAL GCDLLVAAET
ARFGLPEVSR GLIAAGGGTR LPQRIPLALA LELGLTGAMV SAARLGEMGL VNRVVPAAEV
LSTALDLAGQ IAANGPLAVR VTKELMVGEL AAADWDGISA AVAPVFGSAD AREGARAFAE
KRAPRWIGR