| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2713 |
|---|
| Symbol | |
|---|
| ID | 5671104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3209706 |
|---|
| End bp | 3210785 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641241625 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001507045 |
|---|
| Protein GI | 158314537 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCTGG CGGCCCGAAA CTCGAAATTG ACATCGAAGT TGCAAACGGG CTATGGTCCG
CGCGTGTCAG TGTCGAATGT TGCGCTCGGG CTCAGCCTTG CCGGAATCCG TGGGGACGCG
GCGTCGCTCG CCGATGTCGC GCGGCGAGCC GAACGGTCGG GATACGACTC CGTGTGGACG
AGCGAGGCGT GGGGGAGCGA CGCGTTCACG CCGCTGGCCT ACATCGCCGC GCTCACCAGT
CGCCTCAGGC TCGGCACCGC CATCGCGCAG ATGCCGGCGC GGACCCCGGC GACGACGGCG
ATGACGGTGC TGACGCTGCA GCAGCTGTCC CAGGGGCGCG TCCTGCTCGG GCTCGGCGCG
TCGGGGCCAC AGGTCGTCGA GGGGTGGCAC GGCGTGCCCT ACCGCCCTCC GGTGCGGATG
ACGCGCGAGT ACCTGGCCGT GTTGCGCAAG GCACTGGCCG CGACCGAGCG GCTCGAGTTC
TCCGGTGCGA TCTTCACGGT TCCCTACACC GGCCCGGACT CCACCGGGCA GGGGCGTCCG
TTGCGCTCCA CCCTGCCGGG GGCTGCGGAC ACTCCCATCC TCATCGCCGC CCTAGGGCCG
AAGAACGTCG CCATGGCGGT GGAGGAGGCC GACGGCCTGC TCCCGTACCT GTGGAGCCCG
GCGCGCTGGA GCAAGGCCTG GGGGGAGACC CTCGAGAAGG CACCCGAGGG ATTCCAGGTG
GCACCCACGG TCCTCGCCTG CGTCGGCGAC GACCTCGACG CCTGCCGTAA CCAGGTGCGC
CCCCGTATCG CGCTGCACAT CGGGGGCATG GGCTCCAGGT CGAAGAACTT CTACGCCTTG
CTGGTCTCCC GCTACGGGTA CGCCGACGAG GCCAGCCGCA TCCAGGACCT CTACCTGGGT
GGGGACCGCG CGGCGGCCTG CGCCGCCGTT CCCGACGAGC TCGTCGACGA TCTGGCGCTC
GTGGGTCCGC CCGCCCGGAT CGCCGACCAG CTCGCGGTGT GGCGGGACGG GCCGATCACC
ACCCTGATCG TGGAGCCGAC GGACCTGGCC ATGGTGGAGC CCATCGCCAG CCTGTGGTGA
|
|---|
| Protein sequence | MGLAARNSKL TSKLQTGYGP RVSVSNVALG LSLAGIRGDA ASLADVARRA ERSGYDSVWT
SEAWGSDAFT PLAYIAALTS RLRLGTAIAQ MPARTPATTA MTVLTLQQLS QGRVLLGLGA
SGPQVVEGWH GVPYRPPVRM TREYLAVLRK ALAATERLEF SGAIFTVPYT GPDSTGQGRP
LRSTLPGAAD TPILIAALGP KNVAMAVEEA DGLLPYLWSP ARWSKAWGET LEKAPEGFQV
APTVLACVGD DLDACRNQVR PRIALHIGGM GSRSKNFYAL LVSRYGYADE ASRIQDLYLG
GDRAAACAAV PDELVDDLAL VGPPARIADQ LAVWRDGPIT TLIVEPTDLA MVEPIASLW
|
|---|
| |