| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2455 |
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| Symbol | |
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| ID | 5670851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2919945 |
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| End bp | 2922434 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241372 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001506793 |
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| Protein GI | 158314285 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0262289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.779517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGGTCGT TCTGGCAAGC TGCGGGCATG GATGTGGGCA CGGGGGCCCG GGGACCGGTC
GGCGGGGAAT CAGCGTCCTC GGCGGGTTCG GGCGGTGGGG TGGACTTCTT CGTCTCCTAC
ACCGGGGCGG ATGAGGCGTG GGCGACCTGG GTCGCCGAGG TGCTCGAAGC CGCGGGCCGC
ACGGTGGCGG TGCAGGCGTG GGATTCCCCT GCGGGGGAGA ATTTCGTGAC CTGGATCAGC
GTGCAGATGG GCGCTGCGGC CCGGACGGTT GCGGTCTGTT CGCAGGCGTA TTTCGCTTCG
CATTGGTGCA CCCAGGAGTG GACCGGCGCC CTGGCCGGGC GGAAACTGAC CCCGTTGCGT
GTCGCCGACT GTCCAGTCCC GCCGGTGCTG TCGACTATCT CCTACCGGGA CCTGTTCGAC
GTCGACGAGC CCGTAGCGCG ACGGCGTCTG CTGGAGGCGG TCGGCCTGGT CCACCCCGTG
CGGGTTTCCG GTGGCTTCCC CGGCCGGCCG GCCGCCCCGC CCTCGGTGGG GGCGGTGTTC
CCGGGGCGGC TGCCCGCAGT GTGGAATGTG CCCGCGCGGA ACCTACTCTT CACCGGCCGT
GACACGCTCC TGGACGGCCT GCGCACCCAG CTCGCCGCGG GTACTGGCCG TATCGCGATC
GCGGCGTTGC GGGGCGCCGG TGGGGTGGGT AAGTCGCAGC TGGCGGTGGA GTTCGCCTGG
CGGTATGCCG CGGACTACCA GCTGGTCTGG TGGGTGGACG CGGAAACCCC CGCGGGTCTG
CTCGCCGGTC TTGCTGCTCT CGCGAACACT CTCGGGATCG GCTCGGGGGA TCTGCCGGTC
CGGGCGGAGG AGGCGCTGGC GGAGCTGGGA CGTCGACAGA GCTGGCTGCT GGTCTATGAC
AACGTCGGCG ACCCAACGAC GTTGGCGCGG ATGCTTCCGC CGGCCACGGG ACGGCTGGTG
GTGACCTGCC GCGATCCGGG GGTGGGTCGG GTCGGGGTGG AGTTGGTCGA AGTCGGCGAG
TTCACCCGCG CCGAATCGTT CGCGCTTCTG CGCCGCTATC TGCCTACCCT GTCCGACACC
GCCGCCGACC AGCTCGCTGA CGCGCTCGGT GATCTACCGT TGGCTGTCGA CCAGGCCGGG
GCTTTCCTGG CCACCAGTGG TATCCCCGTG CACGACTATC TGGCCCTGCT GGCCACCCGA
CCCGCTTTGC TGCTCGCTGA GGAGACGCTG CATCATCCAG GGCTGGCCGC GACCGTCACC
GCTGCCCGTG AACGGCTCGG CAGCGACCAT CCGGGTGCTG CTGGCCTGCT GGATCGGCTG
GCGTTCCTCG CCCCCGAACC CATCCCACTC CGCCCCGCCG GCAGCGAATG GCTGGCCCTC
GGGGATCCCT ACACCACGCA CACCGCGCTT GCTGCGATCA GCAGGCTCGC GCTCGCCCGC
CGCACCGACA CCACCCTCCA GCTGCACCGC CTCGTCCACG CTCTCCTGCG GGCCCGCCTC
ACCGTCGACC AGCGGCGCAC CGCCCTCGCT GGTGCCCTTG ACCTGCTCGC CACCGTCTAC
CCCGGCGAGG CGGAGGACCC CTCGGCCTGG CCGACCTACG CCACGCTCAC TCCCCACGTC
ACCGCGGTCG CAGGCCATCT CGCTGACTTT CCCGGCCTGG CCGAACCCGA CGGGTTCCGG
CTGCTGCTGC ACCGGACCTG CTGGTACCTG CACTGCAGCG GCCAGAACCA CAGTGTCCGC
ACCCTCAGCC ACACCACCCG CACCCGCTGG ATCACTACCC TCGGCGCTGA CCATCCCGAC
AGCCAGATCA TCACCACCGC CCTCGCCACC GCGCTGGCCG ACCTCGGCGA GCACCGGGCG
GCGCGGGAGC TGGCCGAAGA CACCCTGACC CGCCGCAGCC GGGTCCTCGG CGACGACCAC
CCCCTCACCC TGCAATCGGC GAACAACCTC GCCAACCAGA TGGCCGCCCT CGGCGAGCAC
CAAGCCGCCC GCAAGCTGGC CGAAGACACC CTGACCCGAA TGCGGCGTCT CCTCGGTCAC
GACCACCCCG ACACCCTGGC CTCGGCGAAC AACCTCACCC TTCTGCTGGC CGACCTCGGC
GAGCACCAGG CGGCGCGGGA GCTGGCCGAA GACACCCTGA CCCGCCGCAG CCGGGTCCTC
GGCGACGACC ACCCCCACAC CCTGCGCTCG GCGAACAACC TCGCTTTCCA TCGGGCCGCG
GTGGGGGAGC ACCAGGTGGC GCGGGAGCTG GCCGAGGACA CCCTGACCCG CTGCCGCCGG
GTCCTCGGTG ACGACCATCC CGACACCCTG GCCTCAGCGC ACAACCTCGC CATCGATCTC
AGCGCCTTGG GAGAACACCA GGCAGCCCGG GAACTGGCCG AAGAAACCCT CACCCGCCGC
CGGCGCCTCC TCGGCGACGA CCACCCCCAC ACCCGCGACA GTGCCGGCCA GCTCGAGCTC
CTCCTCGAAC AGCTCGGCCC GGCCCTCTGA
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| Protein sequence | MWSFWQAAGM DVGTGARGPV GGESASSAGS GGGVDFFVSY TGADEAWATW VAEVLEAAGR
TVAVQAWDSP AGENFVTWIS VQMGAAARTV AVCSQAYFAS HWCTQEWTGA LAGRKLTPLR
VADCPVPPVL STISYRDLFD VDEPVARRRL LEAVGLVHPV RVSGGFPGRP AAPPSVGAVF
PGRLPAVWNV PARNLLFTGR DTLLDGLRTQ LAAGTGRIAI AALRGAGGVG KSQLAVEFAW
RYAADYQLVW WVDAETPAGL LAGLAALANT LGIGSGDLPV RAEEALAELG RRQSWLLVYD
NVGDPTTLAR MLPPATGRLV VTCRDPGVGR VGVELVEVGE FTRAESFALL RRYLPTLSDT
AADQLADALG DLPLAVDQAG AFLATSGIPV HDYLALLATR PALLLAEETL HHPGLAATVT
AARERLGSDH PGAAGLLDRL AFLAPEPIPL RPAGSEWLAL GDPYTTHTAL AAISRLALAR
RTDTTLQLHR LVHALLRARL TVDQRRTALA GALDLLATVY PGEAEDPSAW PTYATLTPHV
TAVAGHLADF PGLAEPDGFR LLLHRTCWYL HCSGQNHSVR TLSHTTRTRW ITTLGADHPD
SQIITTALAT ALADLGEHRA ARELAEDTLT RRSRVLGDDH PLTLQSANNL ANQMAALGEH
QAARKLAEDT LTRMRRLLGH DHPDTLASAN NLTLLLADLG EHQAARELAE DTLTRRSRVL
GDDHPHTLRS ANNLAFHRAA VGEHQVAREL AEDTLTRCRR VLGDDHPDTL ASAHNLAIDL
SALGEHQAAR ELAEETLTRR RRLLGDDHPH TRDSAGQLEL LLEQLGPAL
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