| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2447 |
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| Symbol | |
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| ID | 5670843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2906394 |
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| End bp | 2908772 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641241364 |
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| Product | putative ATP-dependent DNA helicase |
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| Protein accession | YP_001506785 |
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| Protein GI | 158314277 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.250058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.190451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACG GCGCGGCCGA GGGGCGCGAT GAGGATCCCC GGTCTGTGGA TGTCCGGCCG
GCAGATCTCC GGCCAGCGGA CGCCCGGTCG GTGGATCCGT GGTCGGCGGA GCTCGCCGCC
GAGCGCCGTC ACCTGGACCG CGCCCGCGCG GCGCTGGTTC GGATGCGGCA CGAGGCCGAG
GCGACGGAGA TCGCCGAAGG CGACCCCGTC GCTGACAAGG TGACGAACGC GTCCCTGAAA
GCGGCGCGGC GGCGGCGCCT CGAGGCGCTG AGCGACCCCG CGAGCGGGGC ACCGTTGTTC
TTCGGACGGA TCGACTACGC CGCGGGCGCC GCCGCCGCGC CGGGTCGGCG CGTCCACCTG
GGACGGCGCC ATGTGCGGGA GGCCGCCGGC GATGATCCGC TGGTCGTCGA CTGGCGCACC
GACATCGCCC GTCCGTACTA CCGCGCCCAT AGGGGCGACG CGATGGGGCT CGTGGCGCGG
CGCCGGTTCG GGTTCGACGG CCCCGAGCTC ACCGCGTTCG AGGAGGAACC ACTCGTCGAA
CCGTCGCCCG GCCCGGCAGG CGCGTCACGA GCCGGCGGGC CGGCCGGAGG CGACCTGCTC
GCCCGCGAGA TCGCGCGGCC CCGCTCGGGG CCCATGCGTG ACATCGTCGC GACGATCCAG
CCCGAGCAGG ACGAGATCGT CCGGGCCGAT CTCGAGGTGA GCGTCTGCGT CCAGGGCGCG
CCGGGCACCG GCAAGACGGC GGTCGGCCTG CACCGGGCTG CCTACCTGCT GTTCGCCTAC
CGGGAGCGGC TCAGTCGCGC CGGGGTGCTC GTCGTCGGGC CGAACCGGGC CTTCCTGCGT
TACATCGGCG CGGTCCTGCC CGCGCTTGGC GAGTTCACCG TCACCCACCG TAGTCTCAGC
GCCCTCGTGG ACATCGCGAC GGCGCGCGGA ACCGACCCGG AGCCAGTGGC CGAGATCAAG
AGCGACGCCC GGATGGCCGT GGTGATCCGC CGGGCGCTCG GCGCCACCCG GCCCGGCGCC
TCCCCGCCGG CTGCCCTGAT CACGAGCTCG CTCGGTCGGT GGACGGTGAG CGGCGACGAG
ATCGCCGGCT TGGCCGCCGG CATCCAGGCT GGCGGCCACC GCCATCGCGT GGCTCGGGAC
CTGCTCGCCC GGCGGATCGC CGCCGCGGTG GTCCGCCGCG CCGAGGAGCG GGGGCACCTG
CCGGCCGACT CCGCGGTGGA GCGCCTCGCC CGCACCCGGT CCGTCAGGGC GGCGGTCGAC
GCCGTCTGGC CGCGCACCGA CGCGGCCGGG CTGATCCACC GGCTGTTCAC CGACCCCGCC
CTGCTCGCCC ACGCCGCCGA CGGCGTGCTC TCCGCGCCCG AGCAGCGCCT GCTGCTGGCC
GACCGGCCGA CGTCGCGGCG GGCCGTCCGC TGGTCGCCCG CCGACCTGTT CTGCCTGGAC
GAGGCACTGG ACCTGATCGA CGGCGTGCCG GCGTTCGGGC ACGTCATCGT GGACGAGGCC
CAGGACCTCT CGGCCATGCA GTGCCGGGCC GTCGGACGCC GCTGCGCCAC CGGCTCGCTC
ACCGTCCTCG GGGATCTGGC CCAGGGCACC ACCGCCTGGG CCGCGCGCTC CTGGGAGCAG
GCGCTTGCCC ACTTCGGTAA GCCCGCCGCG CGGCTGGAGG TGCTGACCCG AGGCCACCGG
GTACCGGCCG AGATCCTCTC GTTCGCCGAC CGTCTGCTCC CGAGCATCGC GCCGGATCTG
CCTCCCGCGT CGTCGACCCG CGCCGTCCCG GGTGCGCTGC GGGTGATCGC CGCCCCGCCG
GACGACCTGG CCGGCGAGGC TGCACACCAG GTTCGTGCCG GGCTGGGCCG CGGCGGCTCG
GTGGCGGTGA TCGCCCCCGA CGAGGCCGTC GGCGGCCTGA CGGCGTCGCT GCGCGCGGCG
GGCCTGCCCG CCACCGCCCT CACCGACGAC GCCGCCCTCA CCGACGACGC CGCCCTCACC
GACGCCGCCC TGACGGAGGG CGCTTCGCTC ACCGACAAGC CCGTGCCGGA AGGGCGGGCG
TCCCGGCCGG TGACTGTCGT GCCCGCGTCG CTCGCGAAGG GACTCGAGTT CGACCATGTG
GTCCTCGTCG ACCCGGCGTC CGTCGCCGGC TCCGGGCCGG GCTCCGTCCA GGGGCTGCGC
CGGCTCTACG TGGTGCTGAC CCGGGCGGTG ACCTCCCTGG CAGTGATCCA CGCGGGTGAG
CTCCCGAGCG CTCTCGCGGA TCCGGGCGGC CCGTTCCCGC GGGTACCCCG GCCCGGGGGA
GCGGGCCGCC CGGATCCCGC GCTGGTCAGG GGACTGGAGG TGGCTCCGGA GTCTGCGCGA
CCTGCGAGTC GCCGTTCGAC CGGGGCTGGC TCACGGTGA
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| Protein sequence | MGDGAAEGRD EDPRSVDVRP ADLRPADARS VDPWSAELAA ERRHLDRARA ALVRMRHEAE
ATEIAEGDPV ADKVTNASLK AARRRRLEAL SDPASGAPLF FGRIDYAAGA AAAPGRRVHL
GRRHVREAAG DDPLVVDWRT DIARPYYRAH RGDAMGLVAR RRFGFDGPEL TAFEEEPLVE
PSPGPAGASR AGGPAGGDLL AREIARPRSG PMRDIVATIQ PEQDEIVRAD LEVSVCVQGA
PGTGKTAVGL HRAAYLLFAY RERLSRAGVL VVGPNRAFLR YIGAVLPALG EFTVTHRSLS
ALVDIATARG TDPEPVAEIK SDARMAVVIR RALGATRPGA SPPAALITSS LGRWTVSGDE
IAGLAAGIQA GGHRHRVARD LLARRIAAAV VRRAEERGHL PADSAVERLA RTRSVRAAVD
AVWPRTDAAG LIHRLFTDPA LLAHAADGVL SAPEQRLLLA DRPTSRRAVR WSPADLFCLD
EALDLIDGVP AFGHVIVDEA QDLSAMQCRA VGRRCATGSL TVLGDLAQGT TAWAARSWEQ
ALAHFGKPAA RLEVLTRGHR VPAEILSFAD RLLPSIAPDL PPASSTRAVP GALRVIAAPP
DDLAGEAAHQ VRAGLGRGGS VAVIAPDEAV GGLTASLRAA GLPATALTDD AALTDDAALT
DAALTEGASL TDKPVPEGRA SRPVTVVPAS LAKGLEFDHV VLVDPASVAG SGPGSVQGLR
RLYVVLTRAV TSLAVIHAGE LPSALADPGG PFPRVPRPGG AGRPDPALVR GLEVAPESAR
PASRRSTGAG SR
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