Gene Franean1_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2371 
Symbol 
ID5670767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2814561 
End bp2816645 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content79% 
IMG OID641241288 
Productserine/threonine protein kinase 
Protein accessionYP_001506709 
Protein GI158314201 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.513467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0774186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACAC CGCTGGCGGC GGGTGACCCC CGGCGCATCG GCCCGTTCGA GATCCACAAC 
AGGATCGGCG CCGGCGGGAT GGGCTCGGTG TACCTCGGGT TCACCGCCGA GGGCCGCGCC
GCGGCCGTCA AGGTGCCCGC CGAGGGCCTC GCCGGCGACC CCGAGTTCCG CGCCCGGTTC
CGGCGCGAGG TCGAGGCCGC CCGCCGGGTC CGCGGCCGCG CCGTCGCCGC GGTCGTCGAC
GCCGACCCCG ACGCGACCTC GCCCTGGATG GCCGTCGAGT ACGTCGAGGG CACCAGCCTC
GCCGACGCGG TGATCCGGCA CGGCCCGATC GAGCAGCGGC TGCTGCACGG CTTCGGGGTG
GGCCTCGCCG ACGCCCTCGT CGCCATCCAC GCGGTCGGCG TGGTGCACCG CGATCTCAAG
CCGTCCAACA TCCTGCTCGC CTGGGACGGG CCGAAGGTGA TCGACTTCGG CATCGCCCGG
GCCAGCGGCA CCCCGACCCA CACCCGCACC GGCATCCTCG TCGGCACCCC CGCCTGGATG
GCGCCCGAGC AGCTGCGCGG CGAGCGCGCG ACCCCGGCGG CCGACGTGTT CGCCTGGGGT
GCCTGCGTCA CCTACGCGGC GACCGGGCAC CCGCCCTTCG GCGGCGCCGA GCCGGCCGAC
GTGCTGACCG TGCTGCGCCG CGACGAGCAG CCCGACCTCG ACGGCGTCCC GCCGGACCTG
CTGGCCGCCG TGCGGGCGGC GCTGGCCCGC CGGCCCGAGG CCCGCCCGAG CGCGGCGGAG
CTGGTCCGGA CGCTGGTCAC CGAACCCGGC TCGCGCGGCG GCTCCCCTGA TCCCGCCCGG
GCGGCCGCGA ACGCACTCAC CCCGTGGCAG TGGGAACCGC CCGCGTCACT CGCGCACCAC
CCCGCCCACT CCGGCCGGGA TGAGCGACCG GCCGCCGAGC GGGCCGAGCG GGCCGAGCGA
CCAGACCGGG GCGAGCGACC GGACCGGGAC GAACGGGCGA CGCAGACGGC ACGCGGGGAA
CGAGAACGCG GGGAGCGGGG CGAGCGCGGA GAACGCGCCG GACGGGTCGC GGCCGCGGCC
GGCGCGGTGG CCGGCGCCGC CGACCCGGGC GGGCCCGCCG CCGGCATCCG GCGGACGGCG
ACGCGCGGGC CCGGGGGGCC GGCCGGCGGC CAGGGGGACG GCCCGGCGAA GTTCCGCGCC
GTCGACCGGC CCACCCAGCC ACTGGCGACC CGCGCGGACC CCGGTTCCTG GGAGGAGCCC
CCGGGTGGGG ACTCCTCCCT CGGCACCGTG CCCGTGCCGC GGTTGTCGGC GCTGGCCGAC
AACCGGAACG AGATCACCGA CCCGTCGATC CGGCCGCGCC GGACCGCCAC CGTGGCCTCG
GTGTCGGCGT TCAACGCGGC GGAGGTGACA GGGCCGTTGC TGACCGCCCA GGCCCCCGCC
GCCACCGGGG CCGGAGGGGC CGGTACCAGT ACCGGTAGCG CCACCGGCGG CGCCGGTACC
CGGGCCGGTG CCGGCGACCA GCCGACCGGC CGCGACCGCG AGCCGGACCA CCCAGGTGGC
GCCAGGGCGG AGCCGGGGGC CTGGCCGCCC GACCCGCGGG CGTGGCTGAG CCTGCTGGCG
GCATCCGGCC GGCGGGACCG TGCCGCCATG GTCGCGGCCG TCGTCGCCTT CGGGCTCGTC
GTCGGCGTGG TCGTCCTGCT CACCGCGTCG GACGCCTCCC GGGCGGAGAG CGGCCCGAGC
CGCCCGTCCC CGGGCCCGTC GCAGCGGGGC GTCACCGCCA CCACCGCGTC CGCCCCCACC
TCCCGGCCCA CCGTGGTCGC GCCGACCACC GTCGCGCGTA CCGGCCATGC CGAGCCGGGG
CAGGGCAGCG CGCCGCCGAC CCAGGCCGGC ATCCCGGCCG GCCCGGAGCT GACGGCGGAC
GTCCAGACCG ACCCGTCGGC GCAGGTGACA CCGACGCACG CCGTCTCCCC CACCGGCGAC
GCCTCCGCCC CGCCGACGCC CGACCCGTCG CTCTCGGCGA CATCGTGTGC CGCCGGAGCC
CGGCCGGAGG GTGTTGTCGC CACCGCCACG CCCGAGCCCT GCTGA
 
Protein sequence
MLTPLAAGDP RRIGPFEIHN RIGAGGMGSV YLGFTAEGRA AAVKVPAEGL AGDPEFRARF 
RREVEAARRV RGRAVAAVVD ADPDATSPWM AVEYVEGTSL ADAVIRHGPI EQRLLHGFGV
GLADALVAIH AVGVVHRDLK PSNILLAWDG PKVIDFGIAR ASGTPTHTRT GILVGTPAWM
APEQLRGERA TPAADVFAWG ACVTYAATGH PPFGGAEPAD VLTVLRRDEQ PDLDGVPPDL
LAAVRAALAR RPEARPSAAE LVRTLVTEPG SRGGSPDPAR AAANALTPWQ WEPPASLAHH
PAHSGRDERP AAERAERAER PDRGERPDRD ERATQTARGE RERGERGERG ERAGRVAAAA
GAVAGAADPG GPAAGIRRTA TRGPGGPAGG QGDGPAKFRA VDRPTQPLAT RADPGSWEEP
PGGDSSLGTV PVPRLSALAD NRNEITDPSI RPRRTATVAS VSAFNAAEVT GPLLTAQAPA
ATGAGGAGTS TGSATGGAGT RAGAGDQPTG RDREPDHPGG ARAEPGAWPP DPRAWLSLLA
ASGRRDRAAM VAAVVAFGLV VGVVVLLTAS DASRAESGPS RPSPGPSQRG VTATTASAPT
SRPTVVAPTT VARTGHAEPG QGSAPPTQAG IPAGPELTAD VQTDPSAQVT PTHAVSPTGD
ASAPPTPDPS LSATSCAAGA RPEGVVATAT PEPC