Gene Franean1_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2357 
Symbol 
ID5675694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2801691 
End bp2802101 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID641241274 
ProductMerR family transcriptional regulator 
Protein accessionYP_001506695 
Protein GI158314187 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.120567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATCG GCGAGCTGGC GGGCGCGGCG GGGACGACGA CCCGGGCGCT GCGCTACTAC 
GAGGAGCAGG GCCTGCTCAA TCCACAGCGC GCCGCGAGCG GTTACCGGTG TTACGACCGC
GAAGACGTCA CGCGGGTCGA GAACATCCGC AAACTGCTCG CGACGGGCTT CACGTTGCAG
GACATCCGGT CTTTTCTTGC TTTTCTCGAC CGCCCGCTGC CCGACCAGTT CCGTTCGGCA
CCCATGTGCC AGGATGCGCT CGCGGTCGCC GCTCGGCGTC TTGCCTCACT CGACGAACGC
ATCGATGCCC TGACAGAGCT CCGGTACCGA CTGGCCCGGC GGCTTCCCGA GCTTGCAGCG
GACACGGCCG AGGTGGGTTC GGTGGAGTGG TCGAGGTCCG CGGCGACCTG A
 
Protein sequence
MRIGELAGAA GTTTRALRYY EEQGLLNPQR AASGYRCYDR EDVTRVENIR KLLATGFTLQ 
DIRSFLAFLD RPLPDQFRSA PMCQDALAVA ARRLASLDER IDALTELRYR LARRLPELAA
DTAEVGSVEW SRSAAT