Gene Franean1_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2305 
Symbol 
ID5675692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2753622 
End bp2754401 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID641241224 
ProductSpoOM family protein 
Protein accessionYP_001506645 
Protein GI158314137 
COG category[R] General function prediction only 
COG ID[COG4326] Sporulation control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.983136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.530714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATGA AGCGGTTCAT GTCGCGGCTT GGGGTCGGCG CCGCCGAGGT GGAGACCGTG 
CTGGACCGTC CGGACGCACT GCCCGGCGCA GTGGTGACCG GACTGACCAC CATCAAGGGT
GGCAAGGTCG AGCAGGAGAT CGAGAAGGTG CTCGTCGCGC TGGAGGCGAC GGTCGAGGTC
GAGACCGACG ACTCCACCTG GTACGAGCAG GTGACCTTCG GTACGCAGCA GATCGGCGGC
GGCTTCGTCA TCCAGCCCGG GCAGGAGCAG TCCGGGCGCT TCGAGCTGCC GGTGCCGTGG
CAGACGCCGA TCACGGATGT CGCCGGCTGG CACCTGCGCG GGATGAAGAT CGGCGTGCGG
ACGACGCTGT CGATCCCCGG CGCGCTGGAC CCGGGTGACC TGGACCCGGT GTCGGTGCAC
CCGCTGCCCG TGCAGGAGGC GGTACTCGCC GCGCTCGGCG ACCTGGGCTT CCACTTCCAC
ACCGCGGACG TCGAGAAGGG CCGCCTGCAC GGCTCCGACC TGCCCTTCTA CCAGGAGATC
GAGCTCAAGC CGTCCGGCGA GTACGCCCGG CGGATCAAGG AGCTGGAGGT CACCTTCCTC
GTCGACGGCA ACGGGATGGA CGTCGTCCTG GAGGCGGACC GCCGGGGCGG GCTGCTCTCC
TCCGGCGGCG ACCAGCTCAG CCGGTTCCGG GTCGGCCACC ACGACACCGA CCGCCACCAG
CTCGCCGGCG CGCTGCACCA GCAGCTGCAG GCCCTCGGCG CGCGCCGCGG CTGGTTCTGA
 
Protein sequence
MGMKRFMSRL GVGAAEVETV LDRPDALPGA VVTGLTTIKG GKVEQEIEKV LVALEATVEV 
ETDDSTWYEQ VTFGTQQIGG GFVIQPGQEQ SGRFELPVPW QTPITDVAGW HLRGMKIGVR
TTLSIPGALD PGDLDPVSVH PLPVQEAVLA ALGDLGFHFH TADVEKGRLH GSDLPFYQEI
ELKPSGEYAR RIKELEVTFL VDGNGMDVVL EADRRGGLLS SGGDQLSRFR VGHHDTDRHQ
LAGALHQQLQ ALGARRGWF