Gene Franean1_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2298 
Symbol 
ID5670697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2748096 
End bp2749394 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content76% 
IMG OID641241218 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001506639 
Protein GI158314131 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.317439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.783172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGGG CGGTCGTGGA CGCCGTGCGG GCGACCTACG GGCCGGCCGG CTGGACCGCC 
ACCATCTTCG TGGCCCAGTC GGCGGTGGTC GCCACCGTGG CCTTCGTCGT GGTCCTCGTC
GCGATCGCCG CCGGCATCCC GATGATGTTC GTGGCGCTTC TCGGCCTCCC GCTGGTGTGG
TTCGCCCTGT TCAGCGCGCG GATGGCGGCG GTCGTGGACG CCTGGCGGTT CCGGGTGGTG
CTCCGCCAGC GGCTGTGGCT TCGTCCCCCG CCGGGCTCGG TGCCCCCCGG GACGCCCCCC
GCCGACACCC CGAGCTGGTT CCGCCGCGGC TGGCTCCGGC TGCGCGGCCG GGGGAACTGG
CTGGAGGTCC TCTACGCCCT GGTCATCCTG CCGCTGTTCG GCTGGCTGGG CGCCTGGGTG
GTCTTCTGCG CGTGGGGTGG CGGGCTGTCG TTCCTGATGT TCCCGCTGTA CGGGCACGCG
CTCGCCGACG GCGGCCGGGT CTTCGGGATG AACCTGGGCT ACGGCGGCTC GCTGGCATTC
CACGTGGGTG TCGGGCTGGT CGTCCTGCTC GCCGCGCCGT GGATCGCCCG CGGGGTGGTC
ACCGCGCACC TCGCGCTGGC GCGGCTGGTG CTCTCCCCAC CGGGCGATCC CGAGCTGCTG
GCCCGGGTGG ACGACCTGGA GTCCAGCCGG GCCGGGATGG TCGCCGCGGC CGCCGCCGAG
CGGCGCCGTA TCGAGCGGGA CCTGCACGAC GGCGCCCAGC AGCGCCTCGT CGCCGTCGCG
ATGACCCTGG GCCGCGCCCA GGCGCGCTTC GCCGACGACC CGGACGGCGC CCACGGGCTC
ATCGCCGAAG CCCACGCGGA GACCAAGCGG GCGCTGGTCG AGCTGCGGGA CCTGGCCCGC
GGGATCCATC CGTCCGTGCT CACGGACCGC GGGCTGGACG CCGCGCTGTC GGGCCTCGCC
GCCCGCTCCC CGGTGCCCGT CACCCTCGAC ATAGAGGCCA CACCGCGGCC GGACATCTCG
ACCGAGTCGG TGGCCTACTT CTTCGTCGCG GAGGCGCTGA CCAACATCGC CCGCCACGCG
CAGGCCTGGC ACGTCCGCAT CGCCGTGCGC CGGGCCGGGA ACCGGCTGAC GGTCGAGGTG
TCCGACGACG GGCGGGGCGG GGCCAGGGAG GGCGCCGGCT CCGGGATCGC CGGCCTGCGT
GACCGCGCCC GCGCCGTCGA CGGCGCGTTC GAACTCGTCA GCCCGCCCGG TGGCGGGACG
ACCCTGCGGA TGGAGCTGCC ATGCGGGGAC GCGACATGA
 
Protein sequence
MRRAVVDAVR ATYGPAGWTA TIFVAQSAVV ATVAFVVVLV AIAAGIPMMF VALLGLPLVW 
FALFSARMAA VVDAWRFRVV LRQRLWLRPP PGSVPPGTPP ADTPSWFRRG WLRLRGRGNW
LEVLYALVIL PLFGWLGAWV VFCAWGGGLS FLMFPLYGHA LADGGRVFGM NLGYGGSLAF
HVGVGLVVLL AAPWIARGVV TAHLALARLV LSPPGDPELL ARVDDLESSR AGMVAAAAAE
RRRIERDLHD GAQQRLVAVA MTLGRAQARF ADDPDGAHGL IAEAHAETKR ALVELRDLAR
GIHPSVLTDR GLDAALSGLA ARSPVPVTLD IEATPRPDIS TESVAYFFVA EALTNIARHA
QAWHVRIAVR RAGNRLTVEV SDDGRGGARE GAGSGIAGLR DRARAVDGAF ELVSPPGGGT
TLRMELPCGD AT