Gene Franean1_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2137 
Symbol 
ID5670537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2565640 
End bp2566434 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID641241058 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_001506479 
Protein GI158313971 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTTT CCGAGACCCC CGCGACACCG GGTGGACCGG TCGTCGAGAT CGAGGGGCTG 
GCCTTCGCGT ATCCGGACGG CCGCCAGGTG CTCTTCGGCG TCGACCTCAT GATCGCTCGC
GGCGAGCGGA TCGCCGTACT GGGGCCGAAC GGCGCGGGCA AGACGACGCT GATGCTGCAT
CTCAACGGAA TCCTGACCGC CGGGTCCGGG ACGGTGCGCA TCGACGGCGC GCCGGTGGCC
GGCGGAAACA TGCGGGAGAT CCGCCGGCGT GTCGGCCTGG TGTTCCAGGA TCCCGACGAC
CAGCTCTTCA TGCCCACGGT CGGCCAGGAC GTCGCCTTCG GCCCGGCGAA CCTCGGCCTG
CGCGGGGCGG AACTCGCCGG GCGGGTCAGC GAGGCGTTGT CGGCGGTCGG TCTGCGCGAC
CACGCGGACC GGGCACCCCA CCATCTCAGC CTGGGCGAAC GGCGCCGGGC GGCGTTGGCC
ACGGTGCTCG CCATGCGGCC CGACGTCCTC GTCCTCGACG AACCGTCCGC GAATCTCGAT
CCGGCGGGGC GGCGGGAGCT CGCCGAGGTC CTCGCCGGCC TGGACCTCAC CCTGGTCATG
GTGACGCACG ATCTTCCCTA CGCGCTGCAG CTCTGCCCGC GTTCGGTCAT CCTGGACGGT
GGAGTGATCG CCGCGGACGG CTCGACGCAG GCCCTGCTCT GCGACGCGGA GCTGATGGCC
GCCCATCGTC TCGAGTTGCC GTTCGGCTTC GAACCTCGCC GAATCGTAGC TGGGAGTGGT
TACGTAGTGC CTTAG
 
Protein sequence
MIVSETPATP GGPVVEIEGL AFAYPDGRQV LFGVDLMIAR GERIAVLGPN GAGKTTLMLH 
LNGILTAGSG TVRIDGAPVA GGNMREIRRR VGLVFQDPDD QLFMPTVGQD VAFGPANLGL
RGAELAGRVS EALSAVGLRD HADRAPHHLS LGERRRAALA TVLAMRPDVL VLDEPSANLD
PAGRRELAEV LAGLDLTLVM VTHDLPYALQ LCPRSVILDG GVIAADGSTQ ALLCDAELMA
AHRLELPFGF EPRRIVAGSG YVVP