Gene Franean1_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2132 
Symbol 
ID5670532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2561423 
End bp2562247 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content71% 
IMG OID641241053 
Productmethyltransferase type 11 
Protein accessionYP_001506474 
Protein GI158313966 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02081] methionine biosynthesis protein MetW 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG ATCTCAGATA CCGCAATGCC GGAAACCCGG CCCTGCTCGA TCTTGTCGAC 
ATTCCGCCTG GCCGTGCCCT CGACTGTGGC TGCGGCGCGG GCGACAACGC GCGGCGGCTG
CGCGAGCGGG GCTGGCGGGT GACCGGGGTG ACCCTCGATC CGGCGGAGCT GGCTGCCGCC
GCGGCGGAAT GCGAGACCGT CAAGCTTGCC GACCTGGCCA AGGGCCTGCC GTTCGCCGCG
GACGGGTCGT TCGACCTCGT CCTGCTCTCG CACATCCTGG AACACCTCGT CGATCCGGCA
CCGCTGCTCG CCGAAGCGCG GCGCGTCCTT GCACCCGGCG GGCGGATCGC CGTCGCTCTG
CCGAACGTCG CGCACTTCCG CCAGCGCGCC CAGCACCTCG TAGGCCGGTT CGACTACACC
GAGACCGGTG TCATGGACTC CACCCACGTC CGCTTCTTCA CTGTCGTGAC CGCTCGGCGA
CTGCTGGAGG ACAACGGGCT CACTGTCCTC GCGGTCGGAG CCAGCGGCGG CCTGCCCCTG
TGGCGCAGTC GGCAGTGGCT ACCGGACTCA CTGGCCGCAC GGGCGGACCG CTGGGCGCTG
GAGACTCGAC CGAACCTCTT CGCCTGGCAG TCGGTGTTCC TTGTGACGGA TGCGCGGACG
AGGTCAGCGG GCGCGCCGCA GGGCGCCGCG ACGACGGCGA TACCGTCCCA ACACGAGCCG
GACATCAGTT TCGTGCCGAA CGCCCCGACG CCACCAGGGG CGCCGGCCAC CGGGATCCCG
TCACCCGCGC CCGCGAACGA CGAGACCGCC GCCGCATCCA CCTAG
 
Protein sequence
MTTDLRYRNA GNPALLDLVD IPPGRALDCG CGAGDNARRL RERGWRVTGV TLDPAELAAA 
AAECETVKLA DLAKGLPFAA DGSFDLVLLS HILEHLVDPA PLLAEARRVL APGGRIAVAL
PNVAHFRQRA QHLVGRFDYT ETGVMDSTHV RFFTVVTARR LLEDNGLTVL AVGASGGLPL
WRSRQWLPDS LAARADRWAL ETRPNLFAWQ SVFLVTDART RSAGAPQGAA TTAIPSQHEP
DISFVPNAPT PPGAPATGIP SPAPANDETA AAST