Gene Franean1_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2116 
Symbolera 
ID5670516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2542134 
End bp2543066 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content73% 
IMG OID641241037 
ProductGTP-binding protein Era 
Protein accessionYP_001506458 
Protein GI158313950 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG AGCTCGCCGA CCCGGCGACG GACTTCCGGT CGGGGTTCGC CTGCCTGGTG 
GGGCGGCCCA ACGCGGGTAA GTCGACGCTG ACGAACGCCC TGGTGGGGAC GAAGGTGGCG
ATCACCTCCG GGCGGCCGCA GACGACCCGC CACGCCATCC GGGGCATCAT CAACCGCCCC
GACGCGCAGC TCATCCTGGT CGACACCCCG GGGTTGCACC GTCCGCGCAC CCTGCTCGGC
CAGCGGCTCA ACGACGTCGT CCGCACGACG CTGTCCGAGG TCGACGTGAT CGGCTTCTGC
ATGCCCGCCG ACGAGCCCCT CGGCCGCGGC GACCGCTTCA TCGCCGACGA GCTGGGCCGG
ATGGCGGGGC GCACCCCGGT GGTGGCGATC CTGACCAAGG TCGACGCGGT CGGCGACCCG
GACCGCGTCG GCGCCCGGCT GCTCGAGGTC TCCGGGCTCG GCGACTTCGC CGACATCGTG
CCGGTGAGCG CGGTGTCGTC CTTCCAGGTC GGCACGCTGG CCGACGTGCT CGTCTCCCGC
CTGCCCGAGG GCCCGCGGCT CTACCCCGAC GGGGAGCTGA CCGACGAGCC CGAGCAGGTC
ATGGTCGCCG AGCTGATCCG CGAGGCGGCG CTGGAGGGGG TGCGTGACGA GCTGCCGCAC
TCACTGGCCG TGGTGGTCGA GGAGATGATC CCGCGGGAGA ACCGCCCGGA GGACAGGCCG
CTGCTCGACG TCCACGTGAA CGTGTACGTG GAGCGGCCGA GCCAGAAGGC GATCGTCATC
GGCGCCGGCG GCTCCCGGCT GCGCGACGTC GGCACCCGGG CCCGGACGCA GATCGAGGCG
CTGCTGGGCA CCCCGATCTA CCTGGACCTG CACGTCAAGG TTGCCAAGGA CTGGCAGCGG
GACCCGAAGC AGCTGCGCCG GCTGGGCTTC TGA
 
Protein sequence
MDIELADPAT DFRSGFACLV GRPNAGKSTL TNALVGTKVA ITSGRPQTTR HAIRGIINRP 
DAQLILVDTP GLHRPRTLLG QRLNDVVRTT LSEVDVIGFC MPADEPLGRG DRFIADELGR
MAGRTPVVAI LTKVDAVGDP DRVGARLLEV SGLGDFADIV PVSAVSSFQV GTLADVLVSR
LPEGPRLYPD GELTDEPEQV MVAELIREAA LEGVRDELPH SLAVVVEEMI PRENRPEDRP
LLDVHVNVYV ERPSQKAIVI GAGGSRLRDV GTRARTQIEA LLGTPIYLDL HVKVAKDWQR
DPKQLRRLGF