Gene Franean1_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2087 
Symbol 
ID5670488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2513338 
End bp2513694 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content71% 
IMG OID641241009 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001506430 
Protein GI158313922 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.72518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCAACAGTGC GGGCACAGCC ACACGCTGGC GGCGCGCCTG CGCCGCCGCC 
GACCTGGCCG ACGAGACGGC GCTCGGCGTC GAGATCGACG GCGAGCCGGT GTGCGTGGTC
CGCTCGGGCG GCCGGCTGTA CGCGATGCGG GACGAGTGCT CGCACGCCGA CGTGATGCTC
TCCGAGGGCG AGGTCGAGAA CGGCCTCATC GAGTGCTGGC TGCACGGCTC CCAGTTCGAC
CTCGCCACCG GCGAGCCGAC GAGCCTGCCG GCGATCGACC CGGTGCCCAC ATATCCAGTG
ACCATCGACG GCGACGACGT CCTCGTCGAC CTTCACACGA ACCCGAAGCG AGGGTGA
 
Protein sequence
MTTPNSAGTA TRWRRACAAA DLADETALGV EIDGEPVCVV RSGGRLYAMR DECSHADVML 
SEGEVENGLI ECWLHGSQFD LATGEPTSLP AIDPVPTYPV TIDGDDVLVD LHTNPKRG