| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2078 |
|---|
| Symbol | |
|---|
| ID | 5670479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2503487 |
|---|
| End bp | 2504542 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641241000 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_001506421 |
|---|
| Protein GI | 158313913 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.7047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCGC GCACCCCTTG CCACGGACTC GGGCGGATTA CTATGACCGC GATGCCAACT
TCTACCGATC GTCGGAGCAA GCCCCGCGAG AGCGGCGGCG CCAGCCAGCC GGACACCACC
ACCGGCCGGC TGCCGGTGAT CGGGCTGCGC GCCTTCCGCC GGCTGACGCT GGCCAGCGTC
CTCCTGCTCG CCGCGATCGT GGTGACCGGC GGCGCCGTCC GGCTGACCGG CTCCGGGCTG
GGCTGCCCCA CCTGGCCGCA GTGCGGCGAC GGCTCCTTCA CCCCGCACTC GGCGTACGCC
CTCAACGGCG CCATCGAGTT CGGCAACCGG GTCATCAGCA TCGTCGTCGG CCTGGTCGTG
CTGGCCCTGC CGCTCGCGGC CCGGCGGCTG CGCGAGCCGC GCCGGGACCT GCTGCTGCTC
TCCCTCGGCC TGTGGCTCGG CTTCGTCGGC CAGGCAGTGC TCGGCGGGAT CACCGTGCTG
GTGAAGCTGC ACCCGGCCAC CGTCGCCGCG CACTTCCTGC TGTCGATGGT CCTGCTGTTC
AACGCCGTCG CGCTGCACCG ACGAGCCCGG CAGGCGGCCG GGCCGACTCC GCACGCCGTC
CGCCCGGAGC TGCTCTGGCT CGCCAGGCTG CTGATGACCG TGGCCGGCGG CGTGCTCGTC
CTCGGCACCG TCGTGACCGG CACCGGGCCG CACAGCGGCG ACAGCGAGGA CACCAAGCGG
TTCGGCTTCG ACATCGTCAA CGTCGCCCAG CTCCACGCCG ACGGCGCGAT GATCCTCACC
GGCCTCACGG TTGCGATGAT CTTCGCCGTC CGGCTGGCAT CCGCCCCGGC GGAGGCCAGC
CGCAGCGCCA ACGCGCTCGC GCTGACCGTC GTCGCCCAGG CCGCGATCGG CTTCACCCAG
TACTTCGCCG GCATCCCGCC GCTGCTCGTC GCCCTCCACA TGGCCGGCGC GACCATCATG
TGGATCGTCA CCGTCCAGCT CTGGCTCGCC ATGAGCGAAC GCCCCCCGGC CGGCGAGAAC
GCCTGGACGG GCTCCCGCCA ACTCGCCGCC GGTTGA
|
|---|
| Protein sequence | MAARTPCHGL GRITMTAMPT STDRRSKPRE SGGASQPDTT TGRLPVIGLR AFRRLTLASV
LLLAAIVVTG GAVRLTGSGL GCPTWPQCGD GSFTPHSAYA LNGAIEFGNR VISIVVGLVV
LALPLAARRL REPRRDLLLL SLGLWLGFVG QAVLGGITVL VKLHPATVAA HFLLSMVLLF
NAVALHRRAR QAAGPTPHAV RPELLWLARL LMTVAGGVLV LGTVVTGTGP HSGDSEDTKR
FGFDIVNVAQ LHADGAMILT GLTVAMIFAV RLASAPAEAS RSANALALTV VAQAAIGFTQ
YFAGIPPLLV ALHMAGATIM WIVTVQLWLA MSERPPAGEN AWTGSRQLAA G
|
|---|
| |