Gene Franean1_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2071 
Symbol 
ID5670472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2494929 
End bp2495702 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content79% 
IMG OID641240993 
Product6-phosphogluconolactonase 
Protein accessionYP_001506414 
Protein GI158313906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.906484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.269504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCGG GCGGCGGGCC CGCTCCGGAA CCGCCCACGG TGGTCGTCCA CGCGGACGCC 
GGCGTGCTCG CGCGGGCGGC GGCGGCGCGG CTCATCACCG CGCTGGTGGA TGCCCAGGCG
GCGCGCGGCG AGGCCTCGAT CGTGCTCACC GGCGGCGGCA TAGGCGTGGC GCTGCTGCGC
GCGGTGCGGG CCAGCCCCGC GGTGGACGCG GTCGACTGGG CCCGGGTGGA CGTCTGGTGG
GGCGACGAGC GCTTCGTGCC GGCGGACTCC CCCGACCGCA ACGACCAGCA GGCCCGGGAG
GCGCTGCTCG CGCACGTTCC GGTGGACCCG GCGCGGGTCT TCCCCATGGG CCACCTCGCG
GGAGCGGGCG GTGTCGCCGA GCCGGAGACG GCTGCCGCGG CGTACGCGGA GGCGCTCGCG
GCGCGGGCGG TGGCCGGTTC CGCCGTTCCG GCGTTCGACG TCCTGCTGCT CGGGCTCGGG
CCGGAGACGC ACGTCGCGTC GATCTTCCCC GACTCACCGG CGGCTGTGGC CACCGGGACG
GTGACCGCCG TCCGGGACTG CCCGAAACCG CCGCCCACCC GGGTGACGCT GACGTTCCCC
GCGCTGCGGG CCGCCCGTGA GGTCTGGGTG GTCGTCGCCG GGGAGGAGAA GGCCGAGGCG
GTGGCGAACG CGCTGACGCC CGGCGCGGAT CCGGTGGCCT TCCCGGCCGC CGGCGCGGTG
GGCCGGGAGC GCACGCTCTG GCTGGTGGAC CGCGCCGCCG CGTCCCGGCT CTGA
 
Protein sequence
MPAGGGPAPE PPTVVVHADA GVLARAAAAR LITALVDAQA ARGEASIVLT GGGIGVALLR 
AVRASPAVDA VDWARVDVWW GDERFVPADS PDRNDQQARE ALLAHVPVDP ARVFPMGHLA
GAGGVAEPET AAAAYAEALA ARAVAGSAVP AFDVLLLGLG PETHVASIFP DSPAAVATGT
VTAVRDCPKP PPTRVTLTFP ALRAAREVWV VVAGEEKAEA VANALTPGAD PVAFPAAGAV
GRERTLWLVD RAAASRL