| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2059 |
|---|
| Symbol | uvrC |
|---|
| ID | 5670460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2481394 |
|---|
| End bp | 2483472 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641240981 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001506402 |
|---|
| Protein GI | 158313894 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0373675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATC CGGCGTCCTA CCGGCCCCCG CCGGGCTCGA TCCCCGAGAC CCCGGGCGTG
TATCGCTTCC GCGACGAACA TGGCCGGGTC ATTTACGTGG GCAAGGCCAA GAGTCTGCGT
GCCCGGCTGG CCAACTACTT CGCCGACATC CACACGCTGC ACCCCCGGAC CCAGCACATG
GTCACCACGG CCGGTTCCGT GGAGTGGACC GTGGTGTCCA CCGAGGTCGA GGCGCTCCAG
CTCGAGTACA CCTGGATCAA GGAGTTCGAT CCGCGCTTCA ACGTCCGCTA CCGCGATGAC
AAGAGCTATC CGAGTCTCGC GGTGACGCTG TACGAGGAGT TCCCGCGGCT CCAGGTGATG
CGTGGGCCCA AGCGGCGCGG CGTGCGCTAC TTCGGCCCCT ACGCGCACGC GTGGGCCATC
AGGGAGACCC TGGACCTGCT GCTGCGGGTC TTCCCCGCGC GCACCTGCAG CTCCGGGGTC
TTCAAGCGGG CTGGCCAGGT GGGCCGTCCC TGCCTGCTCG GGTACATCGA CCGCTGCTCG
GCCCCCTGCG TGGGGCGGGT CGACGCCGAT GCCCACCGCC AGATCGTCGA CGACTTCTGC
GACTTCATGT CCGGGCAGAC CGGCCGCTAC CTGCGCCGGC TCGAGCGCGA GATGCGGGCC
GCGGCCGAGG CGCAGGAGTA CGAGCGCGCC GCGCGGCTGC GTGACGACAT CGGGGCGCTG
CGCCGCGCGG TCGAGAAGCA GGCCGTCGTC CTGCCCGACG GCACCGACGC CGACGTGATC
GCCTTCGCCC AGGACGAGCT GGAGGCCGCG GTCCAGATCT TCTACGTGCG TGGCGGTCGG
GTCCGCGGCC AGCGGGGCTG GGTCGTCGAC AAGCTCGAGG ACGTCACCAC CGCCGACCTC
GTCGAGCAGT TCCTGACCCA GGAGTACCTC GACGGCGTGC GTCCGGCCGG CACCGCCGGC
ACCGCCGATA CCGCCGATAC CGCCGATACC GCCGACCCGG CGCCGGCCGC GCAGATCCCC
CGCGAGATCC TCGTGCCCGA GCTGCCGCCG GACGCCGAGG CCGTCGCCGA GCTCCTCGAA
CGGGCCCGTG GGGCCCGCGT CGACCTGCGC GTCCCCCGCC GGGGGGACAA ACGCACCCTG
ATGGAGACCG TCGAACGCAA CGCCAAGCAG GCGTTCACCC TGCACCGGAC GAAGCGCGCC
GGCGACCTCA CCGCGCGCAG CCGCGCGCTG GCCGACCTCC AGGAGGCGCT GGAGCTCCCT
GACGCCCCGC TGCGGATCGA GTGCTTCGAC GTGTCGAACA CCCAGGGCAC CGACGTCGTG
GCCAGCATGG TGGTCTTCGA GGACGGCCTG CCCCGCAAGT CGGAGTACCG CCGGTTCTCC
ATCCGCGGGG TCGACGGCCA GGACGACGTG GCGAGCATGC GCGAGACCGT CCACCGGCGC
TTCTCCCGCT ATCTGGCGGA GCGGGCCCGC ACTGGCGAGC TCGAGGAGTA CCCGGGCGCC
CCCACCGGCG ACGACGAGGC TCCCGAGACC GGCCGGCCCC GGCGGTTCGC CTACCCGCCC
AACCTCGTCG TCGTCGACGG CGGGCCGCCG CAGGTCGCCG CCGCCGCGCG CGCGCTCGAC
GAGCTCGGCA TCGAGTCCGG GCCCGGCGGG GTGGCACTGT GCGGGCTGGC CAAGCGCCTG
GAGGAGGTCT GGCTGCCCGA CCAGGACGAG CCGGTGATCC TCCCGCGGAC GAGCGAGGCC
CTCTATCTGC TCCAGCGCGT GCGGGACGAG GCACACCGGT TCGCGATCAC CTACCACCGG
CAGAAGCGGT CGACGTCGAT GGTCGCCTCG GCGCTCGACG ACGTCCCGGG GCTCGGGGAG
ACTCGACGCA AGGCGCTGCT GCGGCACTTC GGCTCGGTGG CGAAGGTGCG GGCCGCGGGC
GCCGAGGAGA TCGCGCAGGT GCCGGGCATC GGCCCGCGCA CGGCGGAGGC GATCGTCGCC
GCTCTGGCGC GGTCGGCCCC GGGCACGGAC GCGGCGCCGG CGCCCGCCGT CGACCCGCTG
ACCGGTGAGA TCATCGACTC GGCGGGGGTG ACCCGGTGA
|
|---|
| Protein sequence | MADPASYRPP PGSIPETPGV YRFRDEHGRV IYVGKAKSLR ARLANYFADI HTLHPRTQHM
VTTAGSVEWT VVSTEVEALQ LEYTWIKEFD PRFNVRYRDD KSYPSLAVTL YEEFPRLQVM
RGPKRRGVRY FGPYAHAWAI RETLDLLLRV FPARTCSSGV FKRAGQVGRP CLLGYIDRCS
APCVGRVDAD AHRQIVDDFC DFMSGQTGRY LRRLEREMRA AAEAQEYERA ARLRDDIGAL
RRAVEKQAVV LPDGTDADVI AFAQDELEAA VQIFYVRGGR VRGQRGWVVD KLEDVTTADL
VEQFLTQEYL DGVRPAGTAG TADTADTADT ADPAPAAQIP REILVPELPP DAEAVAELLE
RARGARVDLR VPRRGDKRTL METVERNAKQ AFTLHRTKRA GDLTARSRAL ADLQEALELP
DAPLRIECFD VSNTQGTDVV ASMVVFEDGL PRKSEYRRFS IRGVDGQDDV ASMRETVHRR
FSRYLAERAR TGELEEYPGA PTGDDEAPET GRPRRFAYPP NLVVVDGGPP QVAAAARALD
ELGIESGPGG VALCGLAKRL EEVWLPDQDE PVILPRTSEA LYLLQRVRDE AHRFAITYHR
QKRSTSMVAS ALDDVPGLGE TRRKALLRHF GSVAKVRAAG AEEIAQVPGI GPRTAEAIVA
ALARSAPGTD AAPAPAVDPL TGEIIDSAGV TR
|
|---|
| |